Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq6 141 2e-31 seq60 86.0 1e-14 >seq6 Length=2418782 Score = 141 bits (156), Expect = 2e-31 Identities = 184/248 (74%), Gaps = 6/248 (2%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT--GCTCGAATACATTAGCATG 131 ||||| ||||||||||||||||| | || || ||| | || ||||| ||||| Sbjct 846882 TTTACCTTGAAAAAATTAGAGTGCTTAATGCGGGCTTAAAAGCCTGAATATTCGTGCATG 846823 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||||||||||| | |||||||||||||||||||| | | | ||||| || Sbjct 846822 GAATAATAGAATAGGATCT-CGGTTCTATTTTGTTGGTTTTCTGATCTGAGATAATGGTT 846764 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT-TAT 250 || ||||| || |||||| | ||| || |||||||||||||||||| || Sbjct 846763 AAGAGGGACAGACGGGGGCATTCGTACCGCTGCGTGAGAGGTGAAATTCTTGGACCGTAG 846704 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 || ||| | ||||||||||| || ||||| |||| ||||||||||| |||||||| Sbjct 846703 CGA-GACGTCCCACTGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCA-AGAACGAAA 846646 Query 311 GTTAGGGG 318 || || || Sbjct 846645 GTCAGAGG 846638 >seq60 Length=337646 Score = 86.0 bits (94), Expect = 1e-14 Identities = 91/119 (76%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 ||||||||||||||||||||| | |||||||||||||||||||| | | | ||| Sbjct 7618 GCATGGAATAATAGAATAGGATCT-CGGTTCTATTTTGTTGGTTTTCTGATCTGAGATAA 7560 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 || |||| ||||| || |||||| | ||| || |||||||||||||||||| Sbjct 7559 TGGTTAAGAGGGACAGACGGGGGCATTCGTACCGCTGCGTGAGAGGTGAAATTCTTGGA 7501 Score = 75.2 bits (82), Expect = 2e-11 Identities = 78/100 (78%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT--TTGCTCGAATACATTAGCATG 131 ||||| ||||||||||||||||| | || || ||| | || ||||| ||||| Sbjct 7733 TTTACCTTGAAAAAATTAGAGTGCTTAATGCGGGCTTAAAAGCCTGAATATTCGTGCATG 7674 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT 171 |||||||||||||||| | |||||||||||||| || || Sbjct 7673 GAATAATAGAATAGGATCT-CGGTTCTATTTTGTGGGCTT 7635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915187644800