Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq261 159 1e-36 seq1 159 1e-36 seq29 156 2e-35 seq787 145 3e-32 seq491 145 3e-32 seq89 145 3e-32 seq32 145 3e-32 >seq261 Length=63125 Score = 159 bits (176), Expect = 1e-36 Identities = 121/143 (85%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 541 ATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATA 600 || ||| |||| ||||| || | ||| ||||||||||||||||||||||||||| | Sbjct 43400 ATTGATCGGAGTTAGAGCGTATGCGCTGGTACCCGAAAGATGGTGAACTATGCCTGAGCA 43341 Query 601 GGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATC 660 || ||||||||||||||||||||||||| | || |||||||||| |||||||||||||| Sbjct 43340 GGATGAAGCCAGAGGAAACTCTGGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATC 43281 Query 661 GTCAAATTTGGGTATAGGGGCGA 683 ||| | | |||||||||||||| Sbjct 43280 GTCCGACTCGGGTATAGGGGCGA 43258 >seq1 Length=4215530 Score = 159 bits (176), Expect = 1e-36 Identities = 121/143 (85%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 541 ATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATA 600 || ||| |||| ||||| || | ||| ||||||||||||||||||||||||||| | Sbjct 3485863 ATTGATCGGAGTTAGAGCGTATGCGCTGGTACCCGAAAGATGGTGAACTATGCCTGAGCA 3485804 Query 601 GGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATC 660 || ||||||||||||||||||||||||| | || |||||||||| |||||||||||||| Sbjct 3485803 GGATGAAGCCAGAGGAAACTCTGGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATC 3485744 Query 661 GTCAAATTTGGGTATAGGGGCGA 683 ||| | | |||||||||||||| Sbjct 3485743 GTCCGACTCGGGTATAGGGGCGA 3485721 >seq29 Length=778095 Score = 156 bits (172), Expect = 2e-35 Identities = 115/134 (86%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 550 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 609 ||| ||||| || | ||| ||||||||||||||||||||||||||| ||| |||||| Sbjct 443772 AGTTAGAGCGTATGCGCTGGTACCCGAAAGATGGTGAACTATGCCTGAGCAGGATGAAGC 443713 Query 610 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTT 669 ||||||||||||||||||| | || |||||||||| ||||||||||||||||| | | Sbjct 443712 CAGAGGAAACTCTGGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCCGACTC 443653 Query 670 GGGTATAGGGGCGA 683 |||||||||||||| Sbjct 443652 GGGTATAGGGGCGA 443639 >seq787 Length=3036 Score = 145 bits (160), Expect = 3e-32 Identities = 128/160 (80%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||||||||||| || |||||||| || ||| |||| ||||| ||||| ||||||| Sbjct 1014 GAGTCGAGTTGTTTGAGATTGCAGCTCAAAGAGGGTGGTAGATTTCATCTAAGGCTAAAT 955 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 |||| | |||||||||||| ||||||| |||| ||||| || |||| |||||| | Sbjct 954 ATTGCCACGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGTTGCAAAGAACTTTGAAG 895 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || |||||||| | ||| | |||||| Sbjct 894 AGAGAGTTCAAGAGGACGTGAAACCGCTGAGATTGAAGCG 855 >seq491 Length=11014 Score = 145 bits (160), Expect = 3e-32 Identities = 128/160 (80%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||||||||||| || |||||||| || ||| |||| ||||| ||||| ||||||| Sbjct 771 GAGTCGAGTTGTTTGAGATTGCAGCTCAAAGAGGGTGGTAGATTTCATCTAAGGCTAAAT 712 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 |||| | |||||||||||| ||||||| |||| ||||| || |||| |||||| | Sbjct 711 ATTGCCACGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGTTGCAAAGAACTTTGAAG 652 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || |||||||| | ||| | |||||| Sbjct 651 AGAGAGTTCAAGAGGACGTGAAACCGCTGAGATTGAAGCG 612 >seq89 Length=237237 Score = 145 bits (160), Expect = 3e-32 Identities = 128/160 (80%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||||||||||| || |||||||| || ||| |||| ||||| ||||| ||||||| Sbjct 236875 GAGTCGAGTTGTTTGAGATTGCAGCTCAAAGAGGGTGGTAGATTTCATCTAAGGCTAAAT 236816 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 |||| | |||||||||||| ||||||| |||| ||||| || |||| |||||| | Sbjct 236815 ATTGCCACGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGTTGCAAAGAACTTTGAAG 236756 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || |||||||| | ||| | |||||| Sbjct 236755 AGAGAGTTCAAGAGGACGTGAAACCGCTGAGATTGAAGCG 236716 Score = 140 bits (154), Expect = 1e-30 Identities = 97/110 (88%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 574 CGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTC 633 || ||||||||||||||||||||| ||| ||||||||||||||||||||||||| | | Sbjct 235978 CGGAAGATGGTGAACTATGCCTGAGCAGGATGAAGCCAGAGGAAACTCTGGTGGAAGTCC 235919 Query 634 GCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | |||||||||| ||||||||||||||||| | | |||||||||||||| Sbjct 235918 GAAGCGGTTCTGACGTGCAAATCGATCGTCCGACTCGGGTATAGGGGCGA 235869 >seq32 Length=690286 Score = 145 bits (160), Expect = 3e-32 Identities = 128/160 (80%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||||||||||| || |||||||| || ||| |||| ||||| ||||| ||||||| Sbjct 689656 GAGTCGAGTTGTTTGAGATTGCAGCTCAAAGAGGGTGGTAGATTTCATCTAAGGCTAAAT 689715 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 |||| | |||||||||||| ||||||| |||| ||||| || |||| |||||| | Sbjct 689716 ATTGCCACGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGTTGCAAAGAACTTTGAAG 689775 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || |||||||| | ||| | |||||| Sbjct 689776 AGAGAGTTCAAGAGGACGTGAAACCGCTGAGATTGAAGCG 689815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079971042500