Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq6 239 7e-61 seq15 159 6e-37 seq28 89.7 8e-16 seq111 86.0 1e-14 seq261 84.2 3e-14 >seq6 Length=2418782 Score = 239 bits (264), Expect = 7e-61 Identities = 205/249 (82%), Gaps = 11/249 (4%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| ||| Sbjct 846150 CAGTGTAGCGCGCGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCA 846208 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGA 136 | |||| ||||| | || | |||||||||||||| | ||| ||| | ||| Sbjct 846209 A-CTTCATGCGGCTGAACACCGCTTGTCCCTCTAAGAAGTCG--CACAAACATTTCACGA 846265 Query 137 ------TGGGG-CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA 189 || | |||||||| ||| || |||||| ||||||||||||| |||||||||| Sbjct 846266 GTTATTTGCCGACTATTTAGTAGGCTAGAGTCTCGCTCGTTATCGGAATAAACCAGACAA 846325 Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct 846326 ATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAGAGCTCT 846385 Query 250 CAATCTGTC 258 ||||||||| Sbjct 846386 CAATCTGTC 846394 >seq15 Length=1363941 Score = 159 bits (176), Expect = 6e-37 Identities = 155/195 (79%), Gaps = 11/195 (6%) Strand=Plus/Minus Query 55 TCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA 114 |||||||||||||||||| |||| |||| ||||| | || | ||||||||||||| Sbjct 71445 TCACAGACCTGTTATTGC-TCAA-CTTCATGCGGCTGAACACCGCTTGTCCCTCTAAGAA 71388 Query 115 GCCAGCCACCAACCATAGTCGA------TGGGG-CTATTTAGCAGGTTAAGGTCTCGTTC 167 | | ||| ||| | ||| || | |||||||| ||| || |||||| || Sbjct 71387 GTCG--CACAAACATTTCACGAGTTATTTGCCGACTATTTAGTAGGCTAGAGTCTCGCTC 71330 Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 71329 GTTATCGGAATAAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAAC 71270 Query 228 CATAGAATCAAGAAA 242 || ||||||||||| Sbjct 71269 CACCGAATCAAGAAA 71255 Score = 152 bits (168), Expect = 8e-35 Identities = 93/99 (94%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 71254 TCTCGCTCGTTATCGGAATAAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 71195 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| ||| |||||||||||||||| |||||||||| Sbjct 71194 CCACCAACCACCGAATCAAGAAAGAGCTCTCAATCTGTC 71156 >seq28 Length=813050 Score = 89.7 bits (98), Expect = 8e-16 Identities = 61/66 (92%), Gaps = 2/66 (3%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| |||| | |||||||||||||||||||||||||||||| ||| Sbjct 193849 CAGTGTAGCGCGCGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC- 193906 Query 77 AACTTC 82 |||||| Sbjct 193907 AACTTC 193912 >seq111 Length=204346 Score = 86.0 bits (94), Expect = 1e-14 Identities = 60/66 (91%), Gaps = 2/66 (3%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 |||||||||||||||| |||| | |||||||||||||||||||||||||||||| ||| Sbjct 77 CAGTGTAGCGCGCGTGTAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC- 20 Query 77 AACTTC 82 |||||| Sbjct 19 AACTTC 14 >seq261 Length=63125 Score = 84.2 bits (92), Expect = 3e-14 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct 62132 CAGTGTAGCGCGCGTGCAGCCTCGGACATCTAAGGGCATCACAGACCTGTTATTGC 62077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796789579350