Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq6 214 3e-53 seq111 194 3e-47 seq261 127 4e-27 seq28 98.7 2e-18 seq148 91.5 3e-16 >seq6 Length=2418782 Score = 214 bits (236), Expect = 3e-53 Identities = 207/261 (79%), Gaps = 4/261 (2%) Strand=Plus/Minus Query 69 CGGCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 || |||||||||||||| | ||| | ||||| |||||| ||| ||||||||||||| Sbjct 846249 CGACTTCTTAGAGGGACAAGCGGTGTTCAGCCGCATGAAGTT-GAG-CAATAACAGGTCT 846192 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA 187 ||||||||||||||||| | |||| ||||||||||||||||| || ||||| | | | Sbjct 846191 GTGATGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTGGAGGAATCAACGTGCT-A 846133 Query 188 TCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247 | || | | || |||| | ||||| | | ||| || |||||| ||||||| | | Sbjct 846132 TGTCCATTGTCGAAAGGCATTGGTAACCCGTTGAAAATCCTCCGTGCTCGGGATAGGGAA 846073 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307 ||||||||||| | ||| |||||||||| ||||||||| | | ||||||||| | || || Sbjct 846072 TTGCAATTATTTCCCTTGAACGAGGAATCCCTAGTAAGTGTGAGTCATCAGCTCACGCTG 846013 Query 308 ATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||| Sbjct 846012 ATTACGTCCCTGCCCTTTGTA 845992 >seq111 Length=204346 Score = 194 bits (214), Expect = 3e-47 Identities = 185/233 (79%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 96 AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCA 155 ||||| |||||| ||| |||||||||||||||||||||||||||||| | |||| || Sbjct 6 AGCCGCATGAAGTT-GAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCAGGGCTACA 63 Query 156 CGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATC 215 |||||||||||||| || ||||| | | || || | | || |||| | ||||| | Sbjct 64 CGCGCGCTACACTGGAGGAATCAACGTGCT-ATGTCCATTGTCGAAAGGCATTGGTAACC 122 Query 216 TTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAAT 275 | ||| || |||||| ||||||| | |||||||||||| | ||| |||||||||| Sbjct 123 CGTTGAAAATCCTCCGTGCTCGGGATAGGGAATTGCAATTATTTCCCTTGAACGAGGAAT 182 Query 276 GCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||||| | | ||||||||| | || ||||||||||||||||||||||| Sbjct 183 CCCTAGTAAGTGTGAGTCATCAGCTCACGCTGATTACGTCCCTGCCCTTTGTA 235 >seq261 Length=63125 Score = 127 bits (140), Expect = 4e-27 Identities = 158/215 (73%), Gaps = 15/215 (7%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| | Sbjct 62077 GCAATAACAGGTCTGTGATGCCCTTAGATGTCCGAGGCTGCACGCGCGCTACACTGGAGG 62136 Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233 | ||||| | | || ||| | | || |||| ||| | || | ||| || || || Sbjct 62137 AATCAACGTGCT-ATGACCATTGTCGAAAGGCACTGGTGACCTGTTGAAAATCCTTCATG 62195 Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293 || ||||||| | |||||||||||| | ||| || | ||| | | ||| Sbjct 62196 CTCGGGATAGGGAATTGCAATTATTTC-CTT----------TG---ATCAAGTGTGAGTC 62241 Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||| | || ||||||||||| ||||||||||| Sbjct 62242 ATCAGCTCACGCTGATTACGTCCATGCCCTTTGTA 62276 >seq28 Length=813050 Score = 98.7 bits (108), Expect = 2e-18 Identities = 113/148 (76%), Gaps = 3/148 (2%) Strand=Plus/Minus Query 96 AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCA 155 ||||| |||||| ||| |||||||||||||||||||||||||||||| | |||| ||| Sbjct 193920 AGCCGCATGAAGTT-GAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCAGGGCTGCA 193863 Query 156 CGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATC 215 |||||||||||||| || ||||| | | || || | | || |||| | ||||| | Sbjct 193862 CGCGCGCTACACTGGAGGAATCAACGTGCT-ATGTCCATTGTCGAAAGGCATTGGTAACC 193804 Query 216 TTGTTAAACTCTGTCGTGCTGGGGATAG 243 | ||| || |||||| ||||||| Sbjct 193803 CGTTGAAAATCCTCCGTGCTCGGGATAG 193776 >seq148 Length=144037 Score = 91.5 bits (100), Expect = 3e-16 Identities = 80/99 (81%), Gaps = 3/99 (3%) Strand=Plus/Minus Query 230 CGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCG 289 |||||| || |||| | |||||||||||| | ||| ||||||||| |||||||| | | Sbjct 93842 CGTGCTCGGAATAGGGAATTGCAATTATTTCCCTTGGACGAGGAATCTCTAGTAAGTGTG 93783 Query 290 TGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||| | || ||||||||||||||||||||||| Sbjct 93782 AG---TCAGCTCACGCTGATTACGTCCCTGCCCTTTGTA 93747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947187212800