Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq89 529 6e-148 seq52 518 1e-144 seq362 423 6e-116 seq177 250 8e-64 seq62 212 2e-52 seq43 91.5 5e-16 seq21 87.8 6e-15 >seq89 Length=237237 Score = 529 bits (586), Expect = 6e-148 Identities = 444/546 (81%), Gaps = 34/546 (6%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| ||| |||| || ||| |||| ||||||||||||||||||| | Sbjct 233794 CTTTTACTCTACGAGAGGTTTCCGTCCTCTCTGAGCTAGCCTTAGGACACCTGCGTTACG 233853 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| ||||||| |||| || | || || Sbjct 233854 TTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACACTGTCTTCGGCGCGAGTC 233913 Query 127 GGCCCG-----------CGAAGGACCTTAACGCCAGAAA--ATGGTCGGTGAAGAC---- 169 | || | ||| || | || || ||||| | | || |||| || Sbjct 233914 GTACCAACACCAAGTGTCTAAGTACTTGAATGCAAGAAATAAGAGCCGATGAATACAGCT 233973 Query 170 CAGTTC-CGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC 228 || ||| || | | || |||||||| || |||| | ||||||||||||||| ||| Sbjct 233974 CAATTCTCGTCTTACCGAATAAGTAAAGAATCGATGAAAGTAGTGGTATTTCACCGGCGG 234033 Query 229 CGA--------------AACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAA 274 | | ||| ||||||||||| |||||||||||| | | |||||| | Sbjct 234034 CTATAATTTTTTTTCATAAC--CTCCCACTTATGCTACACCTCTCATGACTCTTCACAGA 234091 Query 275 GTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTT 334 ||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 234092 GTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGTGTTCGCCAAGCCCGTT 234151 Query 335 CCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 234152 CCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 234211 Query 395 CATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACT 454 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 234212 CATGCGCGTCACTAGTTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACT 234271 Query 455 CCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAG 514 |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct 234272 CCCGCCGTTTACCCGCGCTTCGTTGAATTTCTTCACTTTTACATTCAGAGCACTGGGCAG 234331 Query 515 AAATCA 520 |||||| Sbjct 234332 AAATCA 234337 >seq52 Length=376480 Score = 518 bits (574), Expect = 1e-144 Identities = 444/552 (80%), Gaps = 40/552 (7%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| ||| |||| || ||| |||| ||||||||||||||||||| | Sbjct 375179 CTTTTACTCTACGAGAGGTTTCCGTCCTCTCTGAGCTAGCCTTAGGACACCTGCGTTACG 375238 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| ||||||| |||| || | || || Sbjct 375239 TTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACACTGTCTTCGGCGCGAGTC 375298 Query 127 GGCCCG-----------CGAAGGACCTTAACGCCAGAAA--ATGGTCGGTGAAGAC---- 169 | || | ||| || | || || ||||| | | || |||| || Sbjct 375299 GTACCAACACCAAGTGTCTAAGTACTTGAATGCAAGAAATAAGAGCCGATGAATACAGCT 375358 Query 170 CAGTTC-CGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC 228 || ||| || | | || |||||||| || |||| | ||||||||||||||| ||| Sbjct 375359 CAATTCTCGTCTTACCGAATAAGTAAAGAATCGATGAAAGTAGTGGTATTTCACCGGCGG 375418 Query 229 CGA--------------------AACGGCTCCCACTTATTCTACACCTCTCAAGTCATTT 268 | | ||| ||||||||||| |||||||||||| | | || Sbjct 375419 CTATAAAAAAAATTTTTTTTCATAAC--CTCCCACTTATGCTACACCTCTCATGACTCTT 375476 Query 269 CACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAG 328 |||| |||| ||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 375477 CACAGAGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGTGTTCGCCAAG 375536 Query 329 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 375537 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 375596 Query 389 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 448 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 375597 TCCATTCATGCGCGTCACTAGTTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 375656 Query 449 GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACT 508 |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct 375657 GTTACTCCCGCCGTTTACCCGCGCTTCGTTGAATTTCTTCACTTTTACATTCAGAGCACT 375716 Query 509 GGGCAGAAATCA 520 |||||||||||| Sbjct 375717 GGGCAGAAATCA 375728 >seq362 Length=27042 Score = 423 bits (468), Expect = 6e-116 Identities = 264/284 (93%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| |||||||||||| | | |||||| |||| ||||||||| |||||||| Sbjct 7174 CTCCCACTTATGCTACACCTCTCATGACTCTTCACAGAGTCAGACTAGAGTTAAGCTCAA 7233 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| || Sbjct 7234 CAGGGTCTTCTTTCCCCGCTGTATTCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCCAG 7293 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| Sbjct 7294 ATAGTAGATAGGGACAGTGCGAATCTCGTTAATCCATTCATGCGCGTCATTAGTTAGATG 7353 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct 7354 ACGAGGCATTTTGCTACCTTAAGAGAGTCATAGTTACTCCCGTCGTTTACCCGCGCTTCG 7413 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct 7414 TTGAATTTCTTCACTTTTACATTCAGAGCGCTGGGCAGAAATCA 7457 >seq177 Length=118168 Score = 250 bits (276), Expect = 8e-64 Identities = 156/167 (93%), Gaps = 3/167 (2%) Strand=Plus/Minus Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 ||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 53931 TAGATAGCAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCCTTAGTTAG 53872 Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473 |||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 53871 ATGA---GGCGTTTGGCTGCCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 53815 Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 | |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 53814 TAGTTGAATTTCTTCACTTTTACATTCAGAGCACTGGGCAGAAATCA 53768 >seq62 Length=331707 Score = 212 bits (234), Expect = 2e-52 Identities = 125/130 (96%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 391 CATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGT 450 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 73996 CATTCATGCGCGTCACTAGTTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGT 73937 Query 451 TACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGG 510 |||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||| Sbjct 73936 TACTCCCGCCGTTTACTCGCGCTTCGTTGAATTTCTTCACTTTTACATTCAGAGCACTGG 73877 Query 511 GCAGAAATCA 520 ||| |||||| Sbjct 73876 GCACAAATCA 73867 >seq43 Length=478131 Score = 91.5 bits (100), Expect = 5e-16 Identities = 95/122 (78%), Gaps = 12/122 (10%) Strand=Plus/Minus Query 276 TCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTC 335 || || |||| |||| |||||||||| ||||| | ||||||| || ||||| Sbjct 228024 TCAGATTAGAACCAAGTTCAACAGGGT----TTTCCTC------TCCGCCA-GCTCGTTC 227976 Query 336 CCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTC 395 ||||||||||||||||| ||||| ||| || ||||| ||| |||||| || |||||||| Sbjct 227975 CCTTGGCTGTGGTTTCGTTAGATGATAGCTA-GGACAATGGCAATCTCATTCATCCATTC 227917 Query 396 AT 397 || Sbjct 227916 AT 227915 >seq21 Length=1094860 Score = 87.8 bits (96), Expect = 6e-15 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 5 ATCTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTA 64 |||||| |||||| |||||||| || ||| |||| ||||||||||||||||||| Sbjct 742441 ATCTTTCACTCTACGTGAGATTTCCGTCCTCTCTGAGCTAGCCTTAGGACACCTGCGTTA 742382 Query 65 TGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 | ||| |||||||| ||||||||| |||| || || Sbjct 742381 CGTTTTGACAGATGTACCGCCCCAGTCAAATTCTCC 742346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635177924800