Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq197 91.5 2e-16 seq89 91.5 2e-16 seq52 91.5 2e-16 >seq197 Length=101607 Score = 91.5 bits (100), Expect = 2e-16 Identities = 90/114 (79%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||||| || || | || | | || | Sbjct 562 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTTATGTTCTTGGCCGATCGGCCAAT 505 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||| ||||||||||| |||||||| ||||| |||||||||||||||||| Sbjct 504 GGTGCGATGCTACCATCTGAGGGATTATGACTGAATGCCTCTAAGTCAGAATCC 451 >seq89 Length=237237 Score = 91.5 bits (100), Expect = 2e-16 Identities = 90/114 (79%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||||| || || | || | | || | Sbjct 233473 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTTATGTTCTTGGCCGATCGGCCAAT 233416 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||| ||||||||||| |||||||| ||||| |||||||||||||||||| Sbjct 233415 GGTGCGATGCTACCATCTGAGGGATTATGACTGAATGCCTCTAAGTCAGAATCC 233362 >seq52 Length=376480 Score = 91.5 bits (100), Expect = 2e-16 Identities = 90/114 (79%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||||| || || | || | | || | Sbjct 374855 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTTATGTTCTTGGCCGATCGGCCAAT 374798 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||| ||||||||||| |||||||| ||||| |||||||||||||||||| Sbjct 374797 GGTGCGATGCTACCATCTGAGGGATTATGACTGAATGCCTCTAAGTCAGAATCC 374744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819189286400