Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dracunculus_20medinensis_20[genbank_20GCA_5F000946415.1_202014-11- 13] 1,350 sequences; 103,750,844 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq119 349 1e-93 seq15 251 2e-64 seq67 248 3e-63 seq138 212 2e-52 seq23 185 3e-44 seq402 140 1e-30 seq13 140 1e-30 seq170 131 5e-28 seq63 131 5e-28 seq64 111 5e-22 seq19 111 5e-22 seq28 96.9 1e-17 seq6 84.2 7e-14 >seq119 Length=190207 Score = 349 bits (386), Expect = 1e-93 Identities = 386/507 (76%), Gaps = 13/507 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||| |||||| || || | | ||| ||| | || || ||||| | |||||||||| Sbjct 188476 GTACCCATTCCGATAACCGGCCTCAAT-GAGAACGGTCTCGTTATTTTTCGTCACTACCT 188534 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 || | || | || ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 188535 CCTCTTGCTGAGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAAGTGGTAGCCGTT 188594 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||||| Sbjct 188595 TCTCAGGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTACCCGTTACAACCATGGTA 188654 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||| || ||||||||||||||||||| |||||| | |||| || ||||||| Sbjct 188655 GGCACATAAACTACCATCGAAAGTTGATAAGGCAGATACTTGATAGATATGTCGCCGGTA 188714 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACC----AAGGAGCC--CCGAAGGGC 294 | || ||||||||| | |||| |||| || ||||| || ||||| ||| | Sbjct 188715 CTAGACCATGCGATCAGCTAAGCTATTCAGAGTCACCAATTAACGAGCCGTTTAAAGCTC 188774 Query 295 GTTGGTTTTTTATCTAATAAATACACCCCT-TCCGAAGTCGG-GGTTTTTAGCATGTATT 352 | | | |||| |||||||| || | | | | || |||| | ||| ||||||||| Sbjct 188775 GATTGGTTTTAATCTAATAGATGCGCTCGTCAATAAAATCGGAGCTTTGGTGCATGTATT 188834 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATA---AACGATAAC 409 ||||||||||||||||| |||||||| |||| || | ||||| || || ||| | Sbjct 188835 AGCTCTAGAATTACCACAGTTATCCACGTAGGAAATCAAGATCAAGTATATAATAATAGC 188894 Query 410 TGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGATTGCTTATACTTAGACATGCATG 468 || | ||||||||| ||||| ||||||| | | || | | |||| |||||||||| Sbjct 188895 TGTTGTAATGAGCCGTTCGCGGTTTCACCATTTAAGGCAGTATGAACTTTGACATGCATG 188954 Query 469 GCTTAATCTTTGAGACAAGCATATGAC 495 ||||| |||||||| ||||||||||| Sbjct 188955 GCTTAGCCTTTGAGATAAGCATATGAC 188981 >seq15 Length=1363941 Score = 251 bits (278), Expect = 2e-64 Identities = 224/279 (80%), Gaps = 1/279 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||| |||||| || || | | ||| ||| | || || ||||| | |||||||||| Sbjct 1363210 GTACCCATTCCGATAACCGGCCTCAAT-GAGAACGGTCTCGTTATTTTTCGTCACTACCT 1363268 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 || | || | || ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1363269 CCTCTTGCTGAGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAAGTGGTAGCCGTT 1363328 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||||| Sbjct 1363329 TCTCAGGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTACCCGTTACAACCATGGTA 1363388 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||| || ||||||||||||||||||| |||||| | |||| || ||||||| Sbjct 1363389 GGCACATAAACTACCATCGAAAGTTGATAAGGCAGATACTTGATAGATATGTCGCCGGTA 1363448 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAA 279 | || ||||||||| | |||| |||| || ||||||| Sbjct 1363449 CTAGACCATGCGATCAGCTAAGCTATTCAGAGTCACCAA 1363487 >seq67 Length=304510 Score = 248 bits (274), Expect = 3e-63 Identities = 223/279 (80%), Gaps = 1/279 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||| |||||| || || | | ||| ||| | || || ||||| | |||||||||| Sbjct 304501 GTACCCATTCCGATAACCGGCCTCAAT-GAGAACGGTCTCGTTATTTTTCGTCACTACCT 304443 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 || | || | || ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 304442 CCTCTTGCTGAGAGTGGGTAATTTGCGCGCCTGCTGCCTTCTTTGGAAGTGGTAGCCGTT 304383 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||||| Sbjct 304382 TCTCAGGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTACCCGTTACAACCATGGTA 304323 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||| || ||||||||||||||||||| |||||| | |||| || ||||||| Sbjct 304322 GGCACATAAACTACCATCGAAAGTTGATAAGGCAGATACTTGATAGATATGTCGCCGGTA 304263 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAA 279 | || ||||||||| | |||| |||| || ||||||| Sbjct 304262 CTAGACCATGCGATCAGCTAAGCTATTCAGAGTCACCAA 304224 >seq138 Length=159819 Score = 212 bits (234), Expect = 2e-52 Identities = 242/321 (75%), Gaps = 8/321 (2%) Strand=Plus/Plus Query 106 GATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCC 165 || |||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||| Sbjct 7466 GAAGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTACCC 7525 Query 166 GTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAAT 225 ||| |||||||||||| || ||||||||||||||||||| |||||| | |||| Sbjct 7526 GTTACAACCATGGTAGGCACATAAACTACCATCGAAAGTTGATAAGGCAGATACTTGATA 7585 Query 226 GAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACC----AAGG 281 || ||||||| | || ||||||||| | |||| |||| || ||||| || | Sbjct 7586 GATATGTCGCCGGTACTAGACCATGCGATCAGCTAAGCTATTCAGAGTCACCAATTAACG 7645 Query 282 AGCC--CCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCT-TCCGAAGTCGG-GG 337 |||| ||| || | | |||| |||||||| || | | | | || |||| | Sbjct 7646 AGCCGTTTAAAGCTCGATTGGTTTTAATCTAATAGATGCGCTCGTCAATAAAATCGGAGC 7705 Query 338 TTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAA 397 ||| |||||||||||||||||||||||||| |||||||| |||| || | ||||| Sbjct 7706 TTTGGTGCATGTATTAGCTCTAGAATTACCACAGTTATCCACGTAGGAAATCAAGATCAA 7765 Query 398 ATAAACGATAACTGATTTAAT 418 || | ||| ||| | |||| Sbjct 7766 GTATATAATAGCTGTTGTAAT 7786 >seq23 Length=1043350 Score = 185 bits (204), Expect = 3e-44 Identities = 132/152 (87%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 72 GATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCC 131 || ||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||| Sbjct 576427 GAGTGGGTAATTTGCGCGCCTGATGCCTTCCTTGGAAGTGGTAGCCGTTTCTCAGACTCC 576486 Query 132 CTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCC 191 |||| |||| ||||||||| |||| ||||||| |||| |||||||||||| || | Sbjct 576487 CTCTTCGGAGTCGAACCCTTATTCTCCGTTACTCGTTATAACCATGGTAGGCACATAAAC 576546 Query 192 TACCATCGAAAGTTGATAGGGCAGAAATTTGA 223 |||||||||||||||||| |||||| | |||| Sbjct 576547 TACCATCGAAAGTTGATAAGGCAGATACTTGA 576578 >seq402 Length=19027 Score = 140 bits (154), Expect = 1e-30 Identities = 101/117 (86%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 51 GTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGT 110 |||| | ||||| | || | || ||||||||||||||| ||||||||||||||||| || Sbjct 11086 GTCATTCCCTCCTCTTGCTGAGAGTGGGTAATTTGCGCGTCTGCTGCCTTCCTTGGAAGT 11145 Query 111 GGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGT 167 |||||||||||||||||||||||||| || ||||| ||| |||| ||||||||||| Sbjct 11146 TGTAGCCGTTTCTCAGGCTCCCTCTCCAGAGTCGAATCCTTATTCTCCGTTACCCGT 11202 >seq13 Length=1422837 Score = 140 bits (154), Expect = 1e-30 Identities = 198/273 (73%), Gaps = 9/273 (3%) Strand=Plus/Minus Query 232 TCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCC--CCG- 288 ||||||| | || ||||||||| | |||| |||| || ||||||| | | ||| Sbjct 704 TCGCCGGTACTAGACCATGCGATCAGCTAAGCTATTCAGAGTCACCAATTAACGAGCCGT 645 Query 289 ---AAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAG-TCGGGGTTTTTA- 343 ||| || | | |||| |||||||| || | | | | || |||| | ||| Sbjct 644 TTAAAGCTCGATTGGTTTTAATCTAATAGATGCGCTCGTCAATAAAATCGGAGCTTTGGT 585 Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAAC 403 |||||||||||||||||||||||||| |||||||| |||| || | ||||| || | Sbjct 584 GCATGTATTAGCTCTAGAATTACCACAGTTATCCACGTAGGAAATCAAGATCAAGTATAT 525 Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGATTGCTTATACTTAGACA 462 ||| ||| | ||||||||| ||||| ||||||| | | || | | |||| |||| Sbjct 524 AATAGCTGTTGTAATGAGCCGTTCGCGGTTTCACCATTTAAGGCAGTATGAACTTTGACA 465 Query 463 TGCATGGCTTAATCTTTGAGACAAGCATATGAC 495 ||||||||||| |||||||| ||||||||||| Sbjct 464 TGCATGGCTTAGCCTTTGAGATAAGCATATGAC 432 >seq170 Length=126384 Score = 131 bits (144), Expect = 5e-28 Identities = 110/135 (81%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||| ||||||||| |||| |||||||||||| |||||||| Sbjct 91299 TTCTCAGGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTACCCGTTACAACCATGGT 91358 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || ||||||||||||||||||| |||||| | |||| || ||||||| Sbjct 91359 AGGCACATAAACTACCATCGAAAGTTGATAAGGCAGATACTTGATAGATATGTCGCCGGT 91418 Query 240 TCAAGGCCATGCGAT 254 | || |||||| || Sbjct 91419 ACTAGACCATGCCAT 91433 Score = 131 bits (144), Expect = 5e-28 Identities = 110/135 (81%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||| ||||||||| |||| |||||||||||| |||||||| Sbjct 91787 TTCTCAGGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTACCCGTTACAACCATGGT 91846 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || ||||||||||||||||||| |||||| | |||| || ||||||| Sbjct 91847 AGGCACATAAACTACCATCGAAAGTTGATAAGGCAGATACTTGATAGATATGTCGCCGGT 91906 Query 240 TCAAGGCCATGCGAT 254 | || |||||| || Sbjct 91907 ACTAGACCATGCCAT 91921 >seq63 Length=328068 Score = 131 bits (144), Expect = 5e-28 Identities = 110/135 (81%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||| ||||||||| |||| |||||||||||| |||||||| Sbjct 23505 TTCTCAGGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTACCCGTTACAACCATGGT 23564 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || ||||||||||||||||||| |||||| | |||| || ||||||| Sbjct 23565 AGGCACATAAACTACCATCGAAAGTTGATAAGGCAGATACTTGATAGATATGTCGCCGGT 23624 Query 240 TCAAGGCCATGCGAT 254 | || |||||| || Sbjct 23625 ACTAGACCATGCCAT 23639 >seq64 Length=320078 Score = 111 bits (122), Expect = 5e-22 Identities = 99/123 (80%), Gaps = 1/123 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||| |||||| || || | | ||| ||| | || || ||||| | |||||||||| Sbjct 88 GTACCCATTCCGATAACCGGCCTCAAT-GAGAACGGTCTCGTTATTTTTCGTCACTACCT 146 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 || | || | || ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 147 CCTCTTGCTGAGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAAGTGGTAGCCGTT 206 Query 121 TCT 123 ||| Sbjct 207 TCT 209 >seq19 Length=1140157 Score = 111 bits (122), Expect = 5e-22 Identities = 84/99 (85%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 125 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCC 184 |||||||||||||||| ||||||||| |||| |||||||||||| |||||||||| | Sbjct 908816 AGGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTACCCGTTACAACCATGGTAGACA 908757 Query 185 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGA 223 || ||||||||||||||||||| |||||| | |||| Sbjct 908756 CATAAACTACCATCGAAAGTTGATAAGGCAGATACTTGA 908718 >seq28 Length=813050 Score = 96.9 bits (106), Expect = 1e-17 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | |||||||||||| | || | || |||||||||||||||||||||||||||| Sbjct 194012 TATTTTTCGTCACTACCTCCTCTTGCTGAGAGTGGGTAATTTGCGCGCCTGCTGCCTTCC 193953 Query 103 TTGGATGTGGTAGCCG 118 ||||| |||||||||| Sbjct 193952 TTGGAAGTGGTAGCCG 193937 >seq6 Length=2418782 Score = 84.2 bits (92), Expect = 7e-14 Identities = 84/108 (78%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||| |||||| || || | | ||| ||| | || || ||||| | |||||||||| Sbjct 847106 GTACCCATTCCGATAACCGGCCTCAAT-GAGAACGGTCTCGTTATTTTTCGTCACTACCT 847164 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT 108 || | || | || || ||||||||||||||||||||||||||||||| Sbjct 847165 CCTCTTGCTGAGAGTGAGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT 847212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510379609600