Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq8306 230 3e-58 seq16423 122 1e-25 >seq8306 Length=3770 Score = 230 bits (254), Expect = 3e-58 Identities = 205/254 (81%), Gaps = 7/254 (3%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||| |||||||||||||||||| ||||| | |||||||| Sbjct 2427 CTTAACCTTCCAGCACCGGGCAGGAGTCAGTCCGTATACATCGTCTTAC-GACTTCGCAC 2369 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 |||||||||||||| ||||||||||| ||||| || ||||||| || |||| | | Sbjct 2368 GGACCTGTGTTTTTGGTAAACAGTCGTTTCCCCCTGGACTCTGCGCCCCTCACCGCCACC 2309 Query 121 ACACGTC----GTTCAC--CAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTT 174 |||| | || ||| |||| || |||||| |||| ||||||||||| |||||| Sbjct 2308 ACACCGCACGGGTGCACGACAGCTCAGGTCCCCCTTATCCCAAAGTTACGGGGGCATTTT 2249 Query 175 GCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGT 234 ||||| |||||| ||||| ||||| ||| ||||| |||| |||||||| ||||| || Sbjct 2248 GCCGAGTTCCTTCACCACGATTCACTCGATCGCCTCGGTATACTCTACCTATCCACCAGT 2189 Query 235 GTCGGTTTACGGTA 248 ||||||||| |||| Sbjct 2188 GTCGGTTTAGGGTA 2175 >seq16423 Length=721 Score = 122 bits (134), Expect = 1e-25 Identities = 88/102 (86%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 147 CCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCGAACG 206 ||||||||||||||||||| |||||||||| | |||||| ||| ||||| | | | || Sbjct 22 CCTTCTCCCGAAGTTACGGCACCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCG 81 Query 207 CCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 |||| ||||||||||||||||||||||||||||||| |||| Sbjct 82 CCTTGGTATTCTCTACCTGACCACCTGTGTCGGTTTGGGGTA 123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694266590136