Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq8306 226 7e-57 seq16423 125 2e-26 >seq8306 Length=3770 Score = 226 bits (250), Expect = 7e-57 Identities = 305/419 (73%), Gaps = 8/419 (2%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 ||||||| || | | ||||||||| |||| ||||||||||| | |||||| Sbjct 2608 GCATCTTTACTCGTAATGCAATTTCACCGAGTTCATGGTGGAGACAGTAGGGAAATCGTT 2549 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2548 ACTCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 2489 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATC 192 | ||||| ||||||||||| ||||||| | | ||| ||| | || || | Sbjct 2488 TAGTTACCACCGCCGTTTACTGGGGCTTAAGTTCACCGCTACGCATACACTCACAGTTCC 2429 Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 252 |||||||||| |||||||||||| |||| || ||||| || ||| || || ||| Sbjct 2428 CCTTAACCTTCCAGCACCGGGCAGGAGTCAGTCCGTATACATCGTCTTACGACTTCGCAC 2369 Query 253 AGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCA---TGAGC 309 | |||||||||| |||||||||| | ||||| ||| || || || | | Sbjct 2368 GGACCTGTGTTTTTGGTAAACAGTCGTTTCCCCCTGGACTCTGCGCCCCTCACCGCCACC 2309 Query 310 TTACGGAGCAAGTCCTTCAC-CCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 || | | || | || |||| || | |||| |||| ||||||||| | | || Sbjct 2308 ACACCGCACGGGTGCACGACAGCTCA--GGTCCCCCTTATCCCAAAGTTACGGGGGCATT 2251 Query 369 TTGCCTAGTTCCTTC-CCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 ||||| ||||||||| || ||| ||| ||| | ||||| ||||| ||||||| | |||| Sbjct 2250 TTGCCGAGTTCCTTCACCACGA-TTCACTCGATCGCCTCGGTATACTCTACCTATCCAC 2193 >seq16423 Length=721 Score = 125 bits (138), Expect = 2e-26 Identities = 78/84 (93%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 343 CCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCG 402 ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct 22 CCTTCTCCCGAAGTTACGGCACCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCG 81 Query 403 CCTTGGTATTCTCTACCCAACCAC 426 ||||||||||||||||| ||||| Sbjct 82 CCTTGGTATTCTCTACCTGACCAC 105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260549958144