Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq4490 154 3e-35 seq8306 82.4 1e-13 >seq4490 Length=10114 Score = 154 bits (170), Expect = 3e-35 Identities = 151/195 (77%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 40 GGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGT 99 |||||||| ||||||||| | || |||||||||| |||| |||| ||||| | ||| || Sbjct 5315 GGGTAAAATCAACCTGTCTTACGAAGGTCTAAACCTAGCTGACGTCCCCTACTGGTGAGT 5256 Query 100 GAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGG 159 ||| |||| |||| || ||||||| | |||| |||| | |||||||||||| ||||| Sbjct 5255 GAAAAATCTAACGTTTGGCGAATTCCGTTTCGCAATGACAAGAAGAGCCGACAGTGAAGG 5196 Query 160 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAA 219 || |||||||||||| | |||| || ||| | | | ||||||| |||| | || | Sbjct 5195 ATTAAAAAGCAACGTTGTTATGGACAAGTGGTTATTATACGCCAGTTGTCCCCATAGTGA 5136 Query 220 CTTTTCTGGCACCTC 234 || |||||| ||||| Sbjct 5135 CTCTTCTGGAACCTC 5121 >seq8306 Length=3770 Score = 82.4 bits (90), Expect = 1e-13 Identities = 127/176 (72%), Gaps = 14/176 (8%) Strand=Plus/Minus Query 56 TCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT 115 ||||| |||| ||| |||||||||| ||| || ||| |||| ||||| ||||| ||| Sbjct 3171 TCTCACGACGTTCTGAACCCAGCTCGCGTGCCGCTTTAATGGGCGAACAGCCCAACCCTT 3112 Query 116 ---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAA--AAGCA 170 ||||| | | || | | ||| || ||||||||||||| | |||| | || Sbjct 3111 GGGACCGACTCCAGCCCCAGGATGC---GACGAGCCGACATCGAGGTGCCAAACCATGC- 3056 Query 171 ACGTCGCTATGAACGCTTGGCTGCCACA--AGCCAGTTATCCCTGTGGTAACTTTT 224 ||||||||||| |||| || || | | |||| |||||||| | |||| ||||| Sbjct 3055 -CGTCGCTATGAGCGCTCGG--GCAAGATCAGCCTGTTATCCCCGGGGTACCTTTT 3003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854230555392