Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq8306 484 2e-134 seq19803 87.8 7e-15 >seq8306 Length=3770 Score = 484 bits (536), Expect = 2e-134 Identities = 358/413 (87%), Gaps = 5/413 (1%) Strand=Plus/Minus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||| ||| |||||| |||||||| ||||||| ||| |||| ||||| || ||||||| Sbjct 1445 TCGACGACGAAGCTTA-TCCCCCGCCGTCTCACTGCCACGCTA-CACTTGCCAGCATTCG 1388 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTACCTCCG 120 |||||||| |||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 1387 GAGTTTGGCTGATTTCGGTAAGCCGATAAGCCCCCTAGACCATCCAGTGCTCTACCTCCA 1328 Query 121 GGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGT 180 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct 1327 ACAAGAACCACGCAACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGGTGT 1268 Query 181 TTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTT 240 ||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||| Sbjct 1267 TTGATTGGCCTTTCACCCCTATCCACAACTCATCCCCTCCATTTTCAACTGAAGTGGGTT 1208 Query 241 CGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTC 300 ||| |||||||| |||||||| ||||||| |||| ||||||||||||||| |||||| Sbjct 1207 CGGACCTCCACGACGTCTTACCGACGCTTCATCCTGGCCATGGATAGATCACACCGCTTC 1148 Query 301 GGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCA 360 |||||| || | || |||| ||||||| |||||||||||||||||||| || ||||| Sbjct 1147 GGGTCTAGAACACGCGACTC--ACGCCCTTATCGGACTCGCTTTCGCTACGACTCCCCCA 1090 Query 361 -CACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAG 412 |||||||||||||||| || || | | ||||||||||||||||||||||||| Sbjct 1089 CCACGGGTTAACCTCGCCACGCATCACTAACTCGCAGGCTCATTCTTCAAAAG 1037 >seq19803 Length=501 Score = 87.8 bits (96), Expect = 7e-15 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 505 CTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTT 564 |||||| |||||||||||||||||| || | |||||||||| |||||||||||| ||| Sbjct 501 CTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTT 442 Query 565 AACGGGTGGTCCCGCCAGATTCACAC 590 || ||||||| ||| ||||| || Sbjct 441 GGAGGATGGTCCCCCCATATTCAGAC 416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817239533568