Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq8306 722 0.0 seq16423 190 5e-46 >seq8306 Length=3770 Score = 722 bits (800), Expect = 0.0 Identities = 400/400 (100%), Gaps = 0/400 (0%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1842 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 1783 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1782 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 1723 Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGAC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1722 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGAC 1663 Query 181 GCTCCCCTACCCAACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCCCGCTAC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1662 GCTCCCCTACCCAACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCCCGCTAC 1603 Query 241 ATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1602 ATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGC 1543 Query 301 TTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCAC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1542 TTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCAC 1483 Query 361 TTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 |||||||||||||||||||||||||||||||||||||||| Sbjct 1482 TTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 1443 >seq16423 Length=721 Score = 190 bits (210), Expect = 5e-46 Identities = 272/376 (72%), Gaps = 13/376 (3%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| |||||||||| | | || ||| | Sbjct 348 CGACTACGCCTTTCGGCCTCGCCTTAGGGGTCGACTCACCCTGCCCCGATTAACGTTGGA 407 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 | ||||||||||| ||||| |||| || |||||| | || |||| ||| | Sbjct 408 CAGGAACCCTTGGTCTTCCGGCGAGCGGGCTTTTCACCCGCTTTATCGTTACTTATGTCA 467 Query 120 GCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACAC 177 |||||| |||| | || | ||||| || || |||| || |||||| || ||| Sbjct 468 GCATTCGCACTTCTGAT-ACCTCCAGCATACC-TCACAGTACACCTTCACAGGCTTACAG 525 Query 178 GACGCTCCCCTACCCAACCACACAG-------GTTGCCACAGCTTCGGCGGATAACTTAA 230 ||||||||||||||||| || || | |||| ||||||||| | || ||| Sbjct 526 AACGCTCCCCTACCCAACAACGCATAAGCGTCGCTGCCGCAGCTTCGGTGCATGGTTTA- 584 Query 231 GCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAA 290 |||||| ||||| || |||| | ||| ||||||||||||||||||| ||||| || Sbjct 585 GCCCCGTTACATCTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTTCTTTAAA 644 Query 291 GGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACT 350 |||||||||||| |||||||| |||||| ||||| || ||||||| ||||||||| Sbjct 645 TGATGGCTGCTTCTAAGCCAACATCCTGGCTGTCTGGGCCTTCCCACATCGTTTCCCACT 704 Query 351 GAGTCACCACTTAGGG 366 | || |||| ||| Sbjct 705 TAACCATGACTTTGGG 720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177366458368