Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq8306 214 3e-53 seq19394 210 3e-52 >seq8306 Length=3770 Score = 214 bits (236), Expect = 3e-53 Identities = 201/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 9 GCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCA 68 ||||| |||||||||| |||||| ||||| | || || |||| ||||| |||| Sbjct 3338 GCTTCCCGCTTAGATGCTTTCAGCGGTTATCACAACCCGACGTAGCCAACCAGCCATGCT 3279 Query 69 CTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGAC 128 |||||||| |||||||| |||||||||| |||| || ||||||||||||||||| ||| Sbjct 3278 CTTGGCAGAACAACTGGCACACCAGAGGTCAGTCCGTCTCGGTCCTCTCGTACTAAAGAC 3219 Query 129 AGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTC 188 ||| | |||||| |||| |||||||| Sbjct 3218 AGCCCTTCTCAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCACGACGTTC 3159 Query 189 TGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCA 248 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| || Sbjct 3158 TGAACCCAGCTCGCGTGCCGCTTTAATGGGCGAACAGCCCAACCCTTGGGACCGACTCCA 3099 Query 249 GCCCCAGGATGAGACGAGCCGACATCG 275 ||||||||||| ||||||||||||||| Sbjct 3098 GCCCCAGGATGCGACGAGCCGACATCG 3072 >seq19394 Length=520 Score = 210 bits (232), Expect = 3e-52 Identities = 182/226 (81%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75 |||||||||| |||||| ||||| ||||| || ||||| ||| || |||| |||| Sbjct 288 GCTTAGATGCTTTCAGCGGTTATCTCTTCCGTACATAGCTACCCTGCGATGCCTCTGGCG 347 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 ||||| ||| |||||| ||| ||||| ||||||||||||||||| | |||| || Sbjct 348 AGACAACAGGTACACCAGCGGTACGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCC 407 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 |||| |||| ||||||||| | |||||||||| ||||||||| ||||||| | ||||| Sbjct 408 GTCAAGATTCCAACGCCCACGGCAGATAGGGACCAAACTGTCTCACGACGTTTTAAACCC 467 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 ||||| ||| ||||||||| ||||||||||| |||||||||||| Sbjct 468 AGCTCACGTACCTCTTTAAATGGCGAACAGCCATACCCTTGGGACC 513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780649990752