Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq16805 315 2e-83 seq16093 170 6e-40 >seq16805 Length=689 Score = 315 bits (348), Expect = 2e-83 Identities = 284/359 (79%), Gaps = 26/359 (7%) Strand=Plus/Minus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 ||||||||||| ||| |||||||||| ||| ||||||||||| |||| | ||||||| Sbjct 562 GATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAG 503 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286 | ||| | |||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 502 GATGACCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGG 443 Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346 |||||||||||||||||| |||||||||||||| | |||||||| || ||||||||| Sbjct 442 GAATATTGCACAATGGGCGCAAGCCTGATGCAGCCATGCCGCGTGTATGAAGAAGGCCTT 383 Query 347 CGGGTCGTAAAGCTCTGTCCTC-------AAGG-----AAGATAA-------------TG 381 ||||| |||||| || || | |||| ||| ||| || Sbjct 382 CGGGTTGTAAAGTACTTTCAGCGGGGAGGAAGGGAGTAAAGTTAATACCTTTGCTCATTG 323 Query 382 ACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGG 441 ||| ||| | || ||||| |||||||||| |||||||||||||||||||||||| ||| Sbjct 322 ACGTTACCCGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGG 263 Query 442 GGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 | || ||||||| |||||||||| |||||||||| | || ||| ||||| ||||||| Sbjct 262 GTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTC 205 >seq16093 Length=749 Score = 170 bits (188), Expect = 6e-40 Identities = 189/254 (74%), Gaps = 26/254 (10%) Strand=Plus/Minus Query 259 CCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCA 318 ||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||| || Sbjct 253 CCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCA 194 Query 319 GCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCT---------------- 362 || | |||||||| | || ||||| |||||| | ||||||| || Sbjct 193 GCCATGCCGCGTGTGTGAAGAAGGTCTTCGGATTGTAAAGCACTTTAAGTTGGGAGGAAG 134 Query 363 GTCCTCAAG-GAAGA--------TAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTA 413 | | ||| ||| | | ||||| ||| || |||| |||||||||| Sbjct 133 GGCAGTAAGCGAATACCTTGCTGTTTTGACGTTACCAACAGAATAAGCACCGGCTAACTC 74 Query 414 CGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTA 473 |||||||||||||||||||||| |||| || ||||||| |||||||||| ||||||| Sbjct 73 TGTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGAATTACT-GGGCGTA 15 Query 474 AAGGGTGCGTAGGT 487 ||| | |||||||| Sbjct 14 AAGCGCGCGTAGGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497302995968