Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq8306 297 6e-78 seq16423 89.7 2e-15 >seq8306 Length=3770 Score = 297 bits (328), Expect = 6e-78 Identities = 418/566 (74%), Gaps = 22/566 (4%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 ||||||||| |||||| |||||| | | |||||||||| | |||||||| ||||| Sbjct 1110 CGAGTCCGATAAGGGCGTGAGTCGCGTGTTCTAGACCCGAAGCGGTGTGATCTATCCATG 1169 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 |||||||||||| |||||| ||| | |||||||||||||||||| |||||||| Sbjct 1170 GCCAGGATGAAGCGTCGGTAAGACGTCGTGGAGGTCCGAACCCACTTCAGTTGAAAATGG 1229 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 |||||||||| ||||| |||||||||||||| || ||||| | ||||||||||||| Sbjct 1230 AGGGGATGAGTTGTGGATAGGGGTGAAAGGCCAATCAAACACCGTGATAGCTGGTTCTCC 1289 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGT-ATCACCATCGGGGGTAGAGCACTGTTATGG 240 |||||| |||||||| || | || | | || |||||||||||| |||| Sbjct 1290 CCGAAATGCATTTAGGTGCAGCGTTGCGTGGTTCTTGTTGGAGGTAGAGCACTG-GATGG 1348 Query 241 -CTAGGGGGTCATTGCGACTTACC-AAACCATTGCAAACTCCGAATGC--GCATCAGTTT 296 |||||||| | | || |||||| ||| || |||||||||||||| ||| || | Sbjct 1349 TCTAGGGGG-CTTATCGGCTTACCGAAATCA-GCCAAACTCCGAATGCTGGCA--AG-TG 1403 Query 297 TACCGCGGGAGTGAG--GGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGG 354 || || || |||||| ||| ||| | |||| | ||| ||||||| || | || | Sbjct 1404 TAGCGTGGCAGTGAGACGGC--GGGGGATAAGCTTCGTCGTCGAGAGGGAAACAGCCCAG 1461 Query 355 ACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAG 414 | ||||||||||||||| || || || ||| | || || || |||| || Sbjct 1462 ATCATCAGCTAAGGCCCCTAAGTGGTGACTCAGTGGGA--AAGGATGTGGAGTTGCGTAG 1519 Query 415 ACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTA 474 ||| | |||| ||||||||||||||||||| || || ||||||||||||| |||||||| Sbjct 1520 ACAACCAGGAGGTTGGCTTGGAAGCAGCCA-TCCTTGAAAGAGTGCGTAATAGCTCACTG 1578 Query 475 GTCGAG-GAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTACCGAAGCAGTGGG 532 ||| || || || ||| |||||| | |||| ||||||| || ||||||| |||| Sbjct 1579 GTCAAGTGATTC-CGCGCCGATAATGTAGCGGGGCTTAAGTTATCCGCCGAAGCTGTGGC 1637 Query 533 ATCATTTATATGATCGGTAGGGGAGC 558 | | | | | | | ||||||||||| Sbjct 1638 AACCTGTGT-GGTTGGGTAGGGGAGC 1662 >seq16423 Length=721 Score = 89.7 bits (98), Expect = 2e-15 Identities = 72/86 (84%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 395 AACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAA 454 ||||| || || || ||||||| ||||||||||||| |||||||||| ||||||||| Sbjct 697 AACGATGTGGGAAGGCCCAGACAGCCAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAA 639 Query 455 GAGTGCGTAACAGCTCACTAGTCGAG 480 || |||||| |||||||| |||||| Sbjct 638 GAAAGCGTAATAGCTCACTGGTCGAG 613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689264918528