Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq19803 161 2e-37 seq8306 107 4e-21 >seq19803 Length=501 Score = 161 bits (178), Expect = 2e-37 Identities = 235/325 (72%), Gaps = 14/325 (4%) Strand=Plus/Plus Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65 ||| |||||||||| |||| | | |||||||||||||||| || |||||||||| Sbjct 39 ACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGT 98 Query 66 CGGGGAG-TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTT 124 ||| || ||| | || || | ||| ||||||||||||||||||||| | Sbjct 99 CGGTAAGGTGATATGA-ACCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGA 157 Query 125 TGGGTCA---TTGCATG--CTGAATACATAGGT--ATGCAAAGCGAACGCGGCGAACTGA 177 | |||| | ||| |||||| ||||||| ||| | |||||| || ||||||| Sbjct 158 TTCGTCACACTATCATTAACTGAATCCATAGGTTAATG--AGGCGAACCGGGGGAACTGA 215 Query 178 AACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGA 237 |||||||||||| | |||||||||||||||||||||||||| ||||| ||||||||| Sbjct 216 AACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGA 275 Query 238 AATGGGATGAGCCTTTA---CGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGG 294 | |||| |||| | || ||| || |||||||| | |||||||| | Sbjct 276 ACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCG 335 Query 295 AGCCATAGCGGGTGATAGCCCCGTA 319 || ||| |||||| ||||||||| Sbjct 336 CGCGATACAGGGTGACAGCCCCGTA 360 >seq8306 Length=3770 Score = 107 bits (118), Expect = 4e-21 Identities = 180/255 (71%), Gaps = 13/255 (5%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||||||||||| | || ||||||||||||| || | |||||||||| ||| Sbjct 471 GGTGGATGCCTTGGCACCAAGAGCCGATGAAGGACGTTGTGACCTGCGATAAGCCCTGGG 530 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC----CCT-- 123 |||| | | | || ||||||| | | |||||||||||||||| || || Sbjct 531 GAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGA 590 Query 124 -TTGGGTCAT-TG--CATGC--TGAATACATAGGTATGCAAAGCG-AACGCGGCGAACTG 176 | | ||| || | ||| ||||| ||||| || | ||||||| ||| || Sbjct 591 GTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTG 650 Query 177 AAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCG 236 |||||||| |||| | | ||||| ||||| ||| | |||||| |||||||||||||| Sbjct 651 AAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCG 710 Query 237 AAATGGGATGAGCCT 251 ||| ||| ||| || Sbjct 711 AAAGCGGAGGAGGCT 725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918217862912