Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq96 114 4e-23 seq4490 96.9 1e-17 >seq96 Length=67928 Score = 114 bits (126), Expect = 4e-23 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 210 AGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTC 269 ||| ||||| |||| || | | | |||| | |||| | |||||||||| | | | | Sbjct 14322 AGTAGTATTCCACT-GCTGCTATAAAGCTCTAATTTATGCAACACCTCTCATGACTCTCC 14380 Query 270 ACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGC 329 ||| ||| ||||| || ||||||||||| || ||| |||| |||| ||| | Sbjct 14381 TCAATGTCAGACTAAAGCGAAGCTCAACAGAACTTTGTTTTGT-GCTGTTTCC--CAAAC 14437 Query 330 CCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAAT 389 | || |||||||||||||||||||||||||| |||| |||| |||| ||| ||||| || Sbjct 14438 CTCTTTCCTTGGCTGTGGTTTCGCTAGATAGTGGATACGGACTGTGGAAATTTCGTTTAT 14497 Query 390 CCATTCATGCGCGTCACTA 408 |||| |||||||| || Sbjct 14498 TTATTCGCGCGCGTCAGTA 14516 >seq4490 Length=10114 Score = 96.9 bits (106), Expect = 1e-17 Identities = 106/140 (76%), Gaps = 1/140 (1%) Strand=Plus/Minus Query 275 GTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTT 334 ||| || |||||| ||||||| || |||| |||| | |||| | |||| || || Sbjct 4762 GTCAGAATAGAGTTGAGCTCAAGAGAATCTTTTTTCGC-GCTGTGTTTTCCAAACCTGTC 4704 Query 335 CCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 394 |||||||||||||||||| | ||| || |||||| |||||||||| |||| | || | Sbjct 4703 CCCTTGGCTGTGGTTTCGTTGGATGGTGGATAGGAGCAGTGGGAATTACGTTTACTCACT 4644 Query 395 CATGCGCGTCACTAATTAGA 414 ||||| |||| ||| |||| Sbjct 4643 CATGCTTGTCAGTAAATAGA 4624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634875707136