Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterobius_20vermicularis_20[genbank_20GCA_5F000951215.1_202014-09- 25] 19,832 sequences; 150,050,672 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq8306 666 0.0 >seq8306 Length=3770 Score = 666 bits (738), Expect = 0.0 Identities = 486/564 (86%), Gaps = 11/564 (2%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| ||| |||||| ||||||||| |||||||||||||||||||||||||||||| || Sbjct 2937 TCGACCTGTCAGTCTCACAGTCAAGCCCCCTTGTGCACTTACACTCACCACCTGATTACC 2878 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||||||||||||||||||||||||||||||||||| ||| ||||| | |||||||||| Sbjct 2877 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACCCTTTAGGAGG-CGACCGCCCCAG 2819 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | |||||||||| |||||||||||| | || ||||| || ||| || ||||| ||| Sbjct 2818 TCAAACTACCCATCAGGCACTGTCCTTGAACCGGATCACGGTCCACAGTGAGATAACCAG 2759 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 || |||||||||||||||| |||||||||||| ||||||||||||||||||||| || Sbjct 2758 AACAATCAGAGTGGTATTTCACCAACGACTCCACCACCACTAGCGTGGCCGCATCAACGT 2699 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 |||||||||||||||||||||||| || | |||||||||| ||||||| |||||||| Sbjct 2698 CTCCCACCTATCCTACACAAACCGTCCCAATCACCAATACCAAACTATAGTAAAGGTCCC 2639 Query 301 GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGG 360 ||||||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct 2638 GGGGTCTTTCCGTCCTGCTGCGCGTAACGAGCATCTTTACTCGTAATGCAATTTCACCGA 2579 Query 361 GCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 420 | |||| ||||||| |||| | ||||||| ||||||||||||||||||||||||||| Sbjct 2578 GTTCATGGTGGAGACAGTAGGGAAATCGTTACTCCATTCGTGCAGGTCGGAACTTACCCG 2519 Query 421 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2518 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTAA 2459 Query 481 ATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGG 540 || |||| | || || ||||| ||| ||||||||||||||||||| Sbjct 2458 GTTCACCGCTACGCATAC----------ACTCACAGTTCCCCTTAACCTTCCAGCACCGG 2409 Query 541 GCAGGCGTCAGTCCGTATACCTCG 564 ||||| |||||||||||||| ||| Sbjct 2408 GCAGGAGTCAGTCCGTATACATCG 2385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702062380032