Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20ellingtonae_20[genbank_20GCA_5F001723225.1_202016-09-12] 2,246 sequences; 105,964,814 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq13 140 6e-31 >seq13 Length=936042 Score = 140 bits (154), Expect = 6e-31 Identities = 183/247 (74%), Gaps = 5/247 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTG-TTCAAAGCAGGCCTTT-GCTCGAATACATTAGCATG 131 ||||||||||| |||| |||||| |||||| ||||| ||| ||| |||| ||||| Sbjct 228442 TTTACTTTGAACAAATCAGAGTGCTTCAAA-CAGGCGTTTCGCTTGAATGTTCGTGCATG 228500 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 ||||||||||| |||| | |||| | ||||| ||||||| ||||| ||||| || Sbjct 228501 GAATAATAGAAGAGGATTT-CGGTCCGATTTTATTGGTTTTGCTGACCGAGATAATGGTT 228559 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 || || || | ||||| | ||||| || |||||||||||||||||| Sbjct 228560 AACAGAGACAAACGGGGCCATTCGTATTGCTACGTGAGAGGTGAAATTCTTGGACCGTAG 228619 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| ||||| |||||||| || |||| |||| ||||||||||| ||||||||| Sbjct 228620 CAAGACGGACTACAGCGAAAGCATTTGGCAAGAATGTCTTCATTAATCA-AGAACGAAAG 228678 Query 312 TTAGGGG 318 | || || Sbjct 228679 TCAGAGG 228685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915179444608