Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20ellingtonae_20[genbank_20GCA_5F001723225.1_202016-09-12] 2,246 sequences; 105,964,814 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq153 104 3e-20 >seq153 Length=171603 Score = 104 bits (114), Expect = 3e-20 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 40 ATCGCGGGTAATC--GGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGA 97 || |||||||| | || |||||||||| ||||| ||||||| ||||| || ||||| | Sbjct 22822 ATTGCGGGTAAACCCGGTATCTTCACCGGTACTAAGATTTCACCGAGCTTACAGTTGATA 22881 Query 98 CAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGC 157 || ||| || ||| ||| |||| ||||||| | ||||||||||||||| Sbjct 22882 GAGTGCACGAATCATTACGCCTTTCATGCGGGTCAGAACTTAACTGACAAGGAATTTCGC 22941 Query 158 TACCTTAGGACCGTT 172 |||||| |||||||| Sbjct 22942 TACCTTTGGACCGTT 22956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547188093954