Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Globodera_20pallida_20[genbank_20GCA_5F000724045.1_202014-05-30]
6,873 sequences; 123,625,196 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq6569 446 4e-123
seq5356 325 1e-86
seq1010 320 4e-85
seq6592 318 1e-84
seq962 300 4e-79
seq1316 293 6e-77
seq2682 282 1e-73
seq4859 279 1e-72
seq5365 255 1e-65
seq101 145 2e-32
seq5890 134 3e-29
seq2403 111 4e-22
seq1613 91.5 4e-16
seq2264 80.6 7e-13
seq1489 73.4 1e-10
>seq6569
Length=1015
Score = 446 bits (494), Expect = 4e-123
Identities = 268/281 (95%), Gaps = 2/281 (1%)
Strand=Plus/Plus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 CGCGGGAACGCTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 794
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 795 GCCGCTGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 854
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT- 179
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 855 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCCTTG 914
Query 180 -AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 915 CGGCTGACCCCATCAATTAACCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCAC 974
Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279
|||||||||||||||||||||||||||| ||||||||||||
Sbjct 975 TTTCGTGTTTGCAGAGTGCTGTGTTTTTGATAAACAGTCGC 1015
>seq5356
Length=1236
Score = 325 bits (360), Expect = 1e-86
Identities = 326/417 (78%), Gaps = 31/417 (7%)
Strand=Plus/Plus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||| | || |||||||||||||||||| | ||||||||||| | |||||
Sbjct 93 GCATCTTCACGGGGAATTCAATTTCACTGAGTCTATGTTGGAGACAGCGGGGAAGTCGTT 152
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 153 ACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 212
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATC 192
| |||||||||||||||||| |||||||| |||| ||||| || ||| | |
Sbjct 213 TAGTTACGGCCGCCGTTTACTGGGGCTTC-TTCAA-AGCTT-GC--------ACCTCTCC 261
Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 252
|||||||||| ||||||||||||||||| |||||||||||| ||| || || ||||
Sbjct 262 TCTTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGCGACTTCGCAG 321
Query 253 AGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGA-GCTT 311
|| |||||||||| |||||||||||| | |||||| | | | ||| ||| | |||
Sbjct 322 AGCCCTGTGTTTTTGATAAACAGTCGCTACCCCCTGGTCTGTGCCACC-CCATCATACTT 380
Query 312 ACGGAGCAAGTCCTTCACCCTCACCGGCGCAC-CTTCTCCCGAAGTTACG-GTGCCTTTT 369
|| | | | || ||| ||||| ||||||||||| ||| | ||
Sbjct 381 GCGTA---------------TAATGGGGTCACGCTTCTTCCGAAGTTACGCGTG-CAATT 424
Query 370 TGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426
|||| ||||||||| | ||||||||||||||||||||||| ||||||| |||||
Sbjct 425 TGCCGAGTTCCTTCAACATAGTTCTCTCAAGCGCCTTGGTATACTCTACCTGACCAC 481
>seq1010
Length=5412
Score = 320 bits (354), Expect = 4e-85
Identities = 320/410 (78%), Gaps = 30/410 (7%)
Strand=Plus/Plus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||| | || |||||||||||||||||| | ||||||||||| | |||||
Sbjct 399 GCATCTTCACGGGGAATTCAATTTCACTGAGTCTATGTTGGAGACAGCGGGGAAGTCGTT 458
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 459 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 518
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGA-TCAAGAGCTTCGCGTTAGCTAACCCCAT 191
| ||||||||||||||||| | ||||||||| ||||| |||| || ||| |
Sbjct 519 TAGTTACGGCCGCCGTTTA-CTGGGCTTCGATTCAAG-GCTT-GC--------ACCTCTC 567
Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCA 251
| |||||||||||||||||||||||||||| |||||||||||| ||| || || |||
Sbjct 568 CTCTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCATCTTGCGATTTCGCA 627
Query 252 GAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGAC--CGGCATGAGC 309
||| |||||||||| |||||||| || | |||||| | | | | ||||| ||
Sbjct 628 GAGCCCTGTGTTTTTGTTAAACAGTTGCCACCCCCTGGTCTGTGCCCCCACGGCA--CGC 685
Query 310 TTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTT 369
|| | ||| | || || | |||| |||||||||||||| | |
Sbjct 686 TT---GCGCATG-----------CAGTGGGCCTCCTTATCCCGAAGTTACGGAGGTAAAT 731
Query 370 TGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419
|||| ||||||||| | ||||||||||||||||||||||| |||||||
Sbjct 732 TGCCGAGTTCCTTCAACATAGTTCTCTCAAGCGCCTTGGTATACTCTACC 781
>seq6592
Length=1011
Score = 318 bits (352), Expect = 1e-84
Identities = 330/423 (78%), Gaps = 7/423 (2%)
Strand=Plus/Plus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| || |||||||||||||| | | |||||||| | |||| || ||||||||
Sbjct 397 CGCGGGTAACCTGCATCTTCACAGGTACTAAAATTTCACCGGATCTCTCGTTGAGACAGC 456
Query 61 GCCGCCA-TCGTTACGCCATT-CGT-GCAGGTCGGAACTTACCCGACAAGG-AATTTCG- 115
| | | ||||||||||||| ||| || |||| ||| ||||| ||||||| |||||||
Sbjct 457 CGCCCAAGTCGTTACGCCATTACGTCGCGGGTCAGAATTTACCTGACAAGGGAATTTCGT 516
Query 116 CTACCTTAGG-ACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC 174
|||||||||| |||||||| |||||||||||||||||| |||||||| || | ||||||
Sbjct 517 CTACCTTAGGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCAAAGCTTC 576
Query 175 GCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGT 234
| | | ||||| | | |||||||||| ||||||||||||||||| || ||||| |
Sbjct 577 TCTTGCGATAACCTCTCCTTTTAACCTTCCAGCACCGGGCAGGCGTCAGCCCATATACTT 636
Query 235 CCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCT 294
|||||| |||||||||| || |||||||||| |||||||||||| | ||| | ||
Sbjct 637 CCACTTACGTGTTTGCATAGACCTGTGTTTTTGATAAACAGTCGCTACCCCCTTTTCACT 696
Query 295 TCGACCGGCATGAGCTTACGGAGCAAGTCCT-TCACCCTCACCGGCGCACCTTCTCCCGA 353
||||| || ||||| ||||||| | ||||| ||| |||| |||||||||||
Sbjct 697 GCGACCTCCAATAGCTTGACCAGCAAGTGATCTCACCATCAAAGGCGTGCCTTCTCCCGA 756
Query 354 AGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTC 413
|||||||| || ||||| |||||||| | |||||||| ||||||||| | ||||
Sbjct 757 AGTTACGGCACCAATTTGCAGAGTTCCTTAACAAGAGTTCTCCCAAGCGCCTGAGGATTC 816
Query 414 TCT 416
|||
Sbjct 817 TCT 819
>seq962
Length=5977
Score = 300 bits (332), Expect = 4e-79
Identities = 324/430 (75%), Gaps = 27/430 (6%)
Strand=Plus/Plus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| ||| | |||||||||| | || ||||||||| ||||| | |||||||||
Sbjct 1409 CGCGGGTACTCCGCATCTTCACGGAGAATTCAATTTCGCTGAGCATGTCCTGGAGACAGT 1468
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1469 GGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1528
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180
||||||||||||| ||||||||||||||||||| ||||||| | |||||| ||
Sbjct 1529 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCTGGGCTTCATTTCGGAGCTT-GC---- 1583
Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
||||| || ||||||||| |||||||||||||||||| ||||||||||| |||
Sbjct 1584 ----ACCCCTCCACTTAACCTTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTT 1639
Query 241 ----TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTC 296
|| || |||||| |||||||||| ||||||||||| | ||||| | | |
Sbjct 1640 GAAGCCGACTTAGCAGAGCCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGTGC 1699
Query 297 GACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGT 356
|| || |||| | |||| | || || | |||||| ||||||
Sbjct 1700 CCCCTGCTACTGCTT---GCGCAA-----------TAACAGGGCCTCCTTCTTCCGAAGG 1745
Query 357 TACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCT 416
||||| | | |||||| ||||||||| | ||||||||||||||||||||| ||||
Sbjct 1746 TACGGAGGCAATTTGCCGAGTTCCTTCAGGACACTTCTCTCAAGCGCCTTGGTATACTCT 1805
Query 417 ACCCAACCAC 426
||| |||||
Sbjct 1806 ACCTGACCAC 1815
>seq1316
Length=3583
Score = 293 bits (324), Expect = 6e-77
Identities = 215/247 (87%), Gaps = 11/247 (4%)
Strand=Plus/Minus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| || | |||||| ||||| ||||||| ||| |||||||||||| ||||||||
Sbjct 2711 CGCGGGTAGATTGCATCATCACAAACATTTCAACTTCGCTGAGTCTCGGGAGGAGACAGT 2652
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2651 GTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 2592
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180
||||||||||||| |||||||||||||||||| ||| |||| ||||||||||| ||
Sbjct 2591 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTTCAATCAAGAGCTT-GC---- 2537
Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
||||||||| |||| ||||| ||||||||| |||||||| |||||||||||||| |
Sbjct 2536 ----ACCCCATCATTTAATCTTCCAGCACCGGGCCGGCGTCAC-CCCTATACGTCCAC-T 2483
Query 241 TCGTGTT 247
|||||||
Sbjct 2482 TCGTGTT 2476
Score = 251 bits (278), Expect = 2e-64
Identities = 234/292 (80%), Gaps = 15/292 (5%)
Strand=Plus/Minus
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186
||||||| |||||||||||||||||| ||| |||| ||||||||||| || ||
Sbjct 2468 CCGTTATAGTTACGGCCGCCGTTTACTGGGACTTCAATCAAGAGCTT-------GC--AC 2418
Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246
||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2417 CCCATCATTTAATCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 2358
Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATG 306
||||||||||||||||||||| |||||||||||||| || | | | | ||| ||
Sbjct 2357 TTGCAGAGTGCTGTGTTTTTATTAAACAGTCGCAGCCACCGATTTTTTGCAACCCCGTTG 2298
Query 307 AGCTTACGGAGCA-AGTCCTTCACC--CTCACCGGCGCACCTTCTCCCGAAGTTACGGTG 363
||| | | | || |||||| || | ||| |||||||||||||||||||||
Sbjct 2297 GGCTCGCCTTGTACAG--GTTCACCTACTTA-GGGCATACCTTCTCCCGAAGTTACGGTA 2241
Query 364 CCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415
| |||||| ||||||||| || ||||||||||||||||||| | || |||
Sbjct 2240 TCAATTTGCCGAGTTCCTTCTCCTGAGTTCTCTCAAGCGCCTTAGAATACTC 2189
>seq2682
Length=265177
Score = 282 bits (312), Expect = 1e-73
Identities = 234/281 (83%), Gaps = 6/281 (2%)
Strand=Plus/Plus
Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAGC 60
|||| || | |||||||||| || | | ||||||||| ||| ||| || |||||||
Sbjct 13479 GCGGGTAAGCGGCATCTTCACCGCTACTACAATTTCACCGAG-CTCACGGCCGAGACAGT 13537
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13538 GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 13597
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180
||||||||||||| |||||||||||||||||| ||||||||||| | ||||| | |
Sbjct 13598 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATTCAATGCTTCTCTTGC 13657
Query 181 GCTAAC--CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238
| | || ||| || |||||||||| |||||||||||| |||| ||||||||||| ||
Sbjct 13658 GATGACATCCCCTC--TTAACCTTCCAGCACCGGGCAGGTGTCAGGCCCTATACGTCAAC 13715
Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279
|||||| || |||||| |||||||||| |||||||||||
Sbjct 13716 TTTCGTTTTGGCAGAGCCCTGTGTTTTTGCTAAACAGTCGC 13756
>seq4859
Length=1423
Score = 279 bits (308), Expect = 1e-72
Identities = 315/416 (76%), Gaps = 11/416 (3%)
Strand=Plus/Minus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
||||||| || | | ||||||| | |||| | ||| ||||||||| | |||||
Sbjct 752 GCATCTTTACTCGTACTGCAATTTCGCCGAGTTTATGGTTGAGACAGCGGGGAAGTCGTT 693
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 692 ACTCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 633
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC----GTTAGCTAACCC 188
| ||||| ||||||||||| ||||||| || |||||||| | |||||||
Sbjct 632 TAGTTACCACCGCCGTTTACTGGGGCTTAAATTCTCAGCTTCGCCACAAGTGGCTAACCG 573
Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248
| |||||||||| |||||||||||| |||| || ||||| || | ||| ||
Sbjct 572 GTCCTCTTAACCTTCCAGCACCGGGCAGGAGTCAGTCCGTATACATCTCTTGTCGACTTC 513
Query 249 GCAGAGTGCTGTGTTTTTA-ATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGA 307
||| | ||| ||||||| ||||||||||| | |||||| ||| || || ||
Sbjct 512 GCACGGACCTG-GTTTTTAGTTAAACAGTCGCTTCCCCCTGGTCTCTGCGGCCCACACCC 454
Query 308 GCTTACG--GAGCAAG--TCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTG 363
||| ||| ||||||| ||| ||| | | ||| | ||||||||||||||||||| |
Sbjct 453 GCTCACGGAGAGCAAGTCTCCATCA-CGGGGCAGGCCCCCCTTCTCCCGAAGTTACGGGG 395
Query 364 CCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419
| ||||||| |||||||| || | ||||||| | |||||||||||||||||||
Sbjct 394 GCATTTTGCCGAGTTCCTTAACCATAATTCTCTCGATCGCCTTGGTATTCTCTACC 339
>seq5365
Length=1235
Score = 255 bits (282), Expect = 1e-65
Identities = 317/430 (74%), Gaps = 18/430 (4%)
Strand=Plus/Minus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
||||||| || | | ||||||||| | | || ||| ||||||| | |||||
Sbjct 638 GCATCTTTACTCGTAGTGCAATTTCACCGGGCCTATGGTTGAGACAGTCGAGAAGTCGTT 579
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 578 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 519
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC-----------GTTAG 181
| ||||| ||||||||||| || |||| | |||||||| || |
Sbjct 518 TAGTTACCACCGCCGTTTACTGGCGCTTAAGTTCTCAGCTTCGCCACACCGAAATGTGA- 460
Query 182 CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTT 241
|||||| | ||||| |||| ||||||||||||||||| || ||||| || |||
Sbjct 459 CTAACCGGTCCCCTTAACGTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGCCTTA 400
Query 242 CGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCG 301
|| || ||| | ||||||||||| ||||||||||| | ||||| ||| || ||
Sbjct 399 CGGCTTCGCACGGACCTGTGTTTTTAGTAAACAGTCGCTTCTCGCTGGTCTCTGCGGCCA 340
Query 302 GCATGAGCTTACG-GAGCAAGTCCT--TCACCC--TCACCGGCGCACCTTCTCCCGAAGT 356
| |||| | | ||||||||| ||||| | | ||| | ||||||||||||||
Sbjct 339 CCCCCAGCTCGAGAGTGCAAGTCCTCGTCACCAGGTGAT-GGCCCCCCTTCTCCCGAAGT 281
Query 357 TACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCT 416
||||| | | ||||||| |||||||| || ||||| | | | ||||| ||||||||||
Sbjct 280 TACGGGGGCATTTTGCCGAGTTCCTTAACCATAGTTCACCCGAACGCCTCGGTATTCTCT 221
Query 417 ACCCAACCAC 426
||| |||||
Sbjct 220 ACCTGACCAC 211
>seq101
Length=23353
Score = 145 bits (160), Expect = 2e-32
Identities = 203/279 (73%), Gaps = 8/279 (3%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| |||||| ||| ||||||||||||||| | ||||||||
Sbjct 22140 TAAACTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 22081
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
|||||||| ||||| |||| | | | | ||| | | ||||| |||||||||||||||||
Sbjct 22080 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGA 22021
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC---TTCGCGT-TAGC 182
|| | | |||| ||||||| || ||||||| ||| || | | | | || ||
Sbjct 22020 CCCTCA-CGTTAAGGCCGCCTTTAACCGGGGTTTCCGTCTACATCAAATATTAGTATATT 21962
Query 183 TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTT 241
||| ||| |||||| |||||||||||||| | |||||| |||||| | | |||
Sbjct 21961 TAATTATATCTGTTAACCAGCCGGCACCGGGCAGACATCACACTCTATACTTAGATTTTT 21902
Query 242 CGTGTTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| ||| ||| ||||||||||||| | ||||||||||
Sbjct 21901 AATCTTTCAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 21863
>seq5890
Length=1118
Score = 134 bits (148), Expect = 3e-29
Identities = 200/281 (71%), Gaps = 11/281 (4%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||||||||| | ||||||||
Sbjct 470 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 411
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
|||||||| ||||| |||| | | | | ||| | | ||||| |||||||||||||||||
Sbjct 410 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGA 351
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186
|| | | |||| ||||||| || ||||||| ||| |||| | | ||||| | |
Sbjct 350 CCCTCA-CGTTAAGGCCGCCTTTAACCGGGGGTTCTGTCAACATC-AAATGTTAGATCAT 293
Query 187 CCCATCA-----ATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTT 241
|| | ||||||| |||||||||||||| |||||| ||||| | | |||
Sbjct 292 TTAATTATCTTCATTAACCAGCCGGCACCGGGCAGATTTCACACTTTATACATAGATTTT 233
Query 242 CGTGTTT----GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| | | ||| ||||||||||||| | ||||||||||
Sbjct 232 TTTATCTTTAAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 192
>seq2403
Length=69003
Score = 111 bits (122), Expect = 4e-22
Identities = 153/210 (73%), Gaps = 3/210 (1%)
Strand=Plus/Minus
Query 218 CGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTC 277
||||| || ||||| || ||| || || ||| | ||||||||||| |||||||||
Sbjct 8667 CGTCAGTCCATATACATCGTCTTGCGACTTCGCATGGACCTGTGTTTTTAGTAAACAGTC 8608
Query 278 GCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGAGCAAGTC-CTTCACCCTCACC 336
|| | ||||| ||| || ||| | | || | ||||| ||||| | | |
Sbjct 8607 GCTTCTCGCTGGTCTCTGCGGCCGTCTCGCCCTAGCCT-GCAAGAGGCTTCAAGCGCTAC 8549
Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396
||| | ||||||||||||||||||| | | ||||||| |||||||| || ||||| |
Sbjct 8548 GGCCC-CCTTCTCCCGAAGTTACGGGGGCATTTTGCCGAGTTCCTTAACCACAGTTCGCC 8490
Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426
| | ||||||||||||||||||| |||||
Sbjct 8489 CGATCGCCTTGGTATTCTCTACCTGACCAC 8460
Score = 86.0 bits (94), Expect = 2e-14
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396
||| | ||||||||||||||||||| | | ||||||| |||||||| || ||||| |
Sbjct 6343 GGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGCCGAGTTCCTTAACCATAGTTCACC 6284
Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426
| | ||||| ||||||||||||| |||||
Sbjct 6283 CGAACGCCTCGGTATTCTCTACCTGACCAC 6254
>seq1613
Length=112029
Score = 91.5 bits (100), Expect = 4e-16
Identities = 99/130 (76%), Gaps = 6/130 (5%)
Strand=Plus/Minus
Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCA----TCG 70
|||||||| | | | ||||||||||| | || || |||| || || |||
Sbjct 54806 ATCTTCACCGGTACTAAGATTTCACTGAGCTTACAGTTGAAACAGTGCATGCACGAATCG 54747
Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130
||||||| ||| ||| |||| ||||||| | ||||||||||||||||||||| |||||||
Sbjct 54746 TTACGCCTTTCATGCGGGTCAGAACTTAGCTGACAAGGAATTTCGCTACCTTTGGACCGT 54687
Query 131 TATTGTTACG 140
|| ||||||
Sbjct 54686 TA--GTTACG 54679
>seq2264
Length=278406
Score = 80.6 bits (88), Expect = 7e-13
Identities = 79/101 (78%), Gaps = 1/101 (1%)
Strand=Plus/Plus
Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127
||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| ||
Sbjct 245772 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 245831
Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168
|| || ||||| |||||||||||| | |||| ||||||
Sbjct 245832 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 245871
Score = 80.6 bits (88), Expect = 7e-13
Identities = 79/101 (78%), Gaps = 1/101 (1%)
Strand=Plus/Plus
Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127
||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| ||
Sbjct 258476 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 258535
Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168
|| || ||||| |||||||||||| | |||| ||||||
Sbjct 258536 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 258575
Score = 80.6 bits (88), Expect = 7e-13
Identities = 79/101 (78%), Gaps = 1/101 (1%)
Strand=Plus/Plus
Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127
||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| ||
Sbjct 266485 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 266544
Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168
|| || ||||| |||||||||||| | |||| ||||||
Sbjct 266545 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 266584
>seq1489
Length=2939
Score = 73.4 bits (80), Expect = 1e-10
Identities = 72/92 (78%), Gaps = 1/92 (1%)
Strand=Plus/Minus
Query 335 CCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCT 394
||||| | ||||||||| ||||||||| | | |||||| |||||||| || |||||
Sbjct 2895 CCGGCCCCCCTTCTCCCTAAGTTACGGGGGCAATTTGCCGAGTTCCTTAACCACAGTTCA 2836
Query 395 CTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426
| | ||||| ||||||||||||| |||||
Sbjct 2835 CCCGT-CGCCTCGGTATTCTCTACCTGACCAC 2805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260713345216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |