Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Globodera_20pallida_20[genbank_20GCA_5F000724045.1_202014-05-30]
6,873 sequences; 123,625,196 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq2264 95.1 6e-18
seq809 82.4 4e-14
>seq2264
Length=278406
Score = 95.1 bits (104), Expect = 6e-18
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| ||||||||| ||||||||||||||||| |||||||| ||||||
Sbjct 249132 GGAAAAGAAACTAACGAGGATTCCCGTAGTAACGGCGAGTGAACTGGGAAGAGTCCAGCG 249073
Query 61 CCGAATC 67
| |||||
Sbjct 249072 CTGAATC 249066
Score = 95.1 bits (104), Expect = 6e-18
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| ||||||||| ||||||||||||||||| |||||||| ||||||
Sbjct 261875 GGAAAAGAAACTAACGAGGATTCCCGTAGTAACGGCGAGTGAACTGGGAAGAGTCCAGCG 261816
Query 61 CCGAATC 67
| |||||
Sbjct 261815 CTGAATC 261809
>seq809
Length=160633
Score = 82.4 bits (90), Expect = 4e-14
Identities = 58/65 (89%), Gaps = 1/65 (2%)
Strand=Plus/Plus
Query 4 AAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG-CC 62
|||||||||||| ||||||||| ||||||||||||||||| |||||||| |||||| |
Sbjct 142355 AAAGAAACTAACGAGGATTCCCGTAGTAACGGCGAGTGAACTGGGAAGAGTCCAGCGACT 142414
Query 63 GAATC 67
|||||
Sbjct 142415 GAATC 142419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230385154320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |