Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20pallida_20[genbank_20GCA_5F000724045.1_202014-05-30] 6,873 sequences; 123,625,196 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq2682 381 1e-103 seq5356 316 4e-84 seq5365 311 2e-82 seq4859 302 1e-79 seq1010 293 5e-77 seq6592 288 2e-75 seq962 277 4e-72 seq6569 257 4e-66 seq1316 181 2e-43 seq1613 132 1e-28 seq949 122 2e-25 seq2403 113 1e-22 seq2264 82.4 2e-13 seq5890 80.6 6e-13 seq1489 80.6 6e-13 seq887 80.6 6e-13 seq101 80.6 6e-13 seq1117 78.8 2e-12 >seq2682 Length=265177 Score = 381 bits (422), Expect = 1e-103 Identities = 297/352 (84%), Gaps = 4/352 (1%) Strand=Plus/Plus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64 |||||||||||||| | ||||||||||||||| | | ||||||||||||| |||| Sbjct 13488 CGGCATCTTCACCGCTACTACAATTTCACCGAGCTCACGGCCGAGACAGTGCCCAGATCG 13547 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 13548 TTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 13607 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT 184 |||||||||||||||||||||||||||||| |||| |||||| |||| | ||| Sbjct 13608 TATAGTTACGGCCGCCGTTTACTGGGGCTTCGATTCAATGCTTCTCTTGCGATGACATCC 13667 Query 185 CCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGC 244 || |||||||||||||||||||||||| ||||| ||||||| || ||| || || || Sbjct 13668 CCTCTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCCTATACGTCAACTTTCGTTTTGGC 13727 Query 245 AGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCAT---A 301 ||| |||||||||||| ||||||||||| |||||| ||||||||||||| || | | Sbjct 13728 AGAGCCCTGTGTTTTTGCTAAACAGTCGCCTGGGCCATTTCTCTGCGGCCTCTCTTTGCA 13787 Query 302 GA-CAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || |||| ||||||||||| ||||||| |||| | |||||||||||||||| Sbjct 13788 GAGGAGGCTCCCCTTCTCCCGAAGTTACAGGGTTAATTTGCCGAGTTCCTTA 13839 >seq5356 Length=1236 Score = 316 bits (350), Expect = 4e-84 Identities = 296/374 (79%), Gaps = 22/374 (6%) Strand=Plus/Plus Query 2 ACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAA 61 |||| |||||||||| |||| | ||||||||| |||||||| | ||||||| | || Sbjct 88 ACCCCGCATCTTCACGGGGAATTCAATTTCACTGAGTCTATGTTGGAGACAGCGGGGAAG 147 Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 ||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 148 TCGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 207 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACA 181 ||||||||||||||||||||||||||||||||| |||| || |||| || Sbjct 208 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTT--CTTCAAAGC-----TTGC----ACC 256 Query 182 GATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241 ||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct 257 TCTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGCGACTT 316 Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTG-CGGCCTGTCAT 300 ||||| |||||||||||| |||||||||||| ||| ||| || | || |||| Sbjct 317 CGCAGAGCCCTGTGTTTTTGATAAACAGTCGCTACCCCCTGGTCTGTGCCACCCCATCAT 376 Query 301 A------GACA----GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCT 350 | | | || | ||||| || |||||||| | || |||||||||||||| Sbjct 377 ACTTGCGTATAATGGGGTCACGCTTCTTCCGAAGTTACGCGTGCAATTTGCCGAGTTCCT 436 Query 351 TAACAATAGTTCTC 364 | | ||||||||| Sbjct 437 TCAACATAGTTCTC 450 >seq5365 Length=1235 Score = 311 bits (344), Expect = 2e-82 Identities = 301/395 (76%), Gaps = 39/395 (10%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||||| || | | | ||||||||||| | |||| ||||||||||| || ||||| Sbjct 638 GCATCTTTACTCGTAGTGCAATTTCACCGGGCCTATGGTTGAGACAGTCGAGAAGTCGTT 579 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 578 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 519 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCG----------ATTGCTC 176 ||||||| |||||||||||||| |||||||||| | |||||| || | Sbjct 518 TAGTTACCACCGCCGTTTACTGGCGCTTAAGTTCTCAGCTTCGCCACACCGAAATGTGAC 459 Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGC 236 |||| | |||||||||| ||||||||||||||||||||||| | ||||||||| ||| | Sbjct 458 TAACCGGTCCCCTTAACGTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGCCTTAC 399 Query 237 GACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC-- 294 | ||| ||| |||||||||||| |||||||||||||| || ||||||||||| Sbjct 398 GGCTTCGCACGGACCTGTGTTTTTAGTAAACAGTCGCTTCTCGCTGGTCTCTGCGGCCAC 339 Query 295 ------------------TGTCATAGACA---------GGCACCCCTTCTCCCTAAGTTA 327 ||| | | || ||| ||||||||||| |||||| Sbjct 338 CCCCAGCTCGAGAGTGCAAGTCCTCGTCACCAGGTGATGGCCCCCCTTCTCCCGAAGTTA 279 Query 328 CGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTC 362 ||||| ||||||||||||||||||||| ||||||| Sbjct 278 CGGGGGCATTTTGCCGAGTTCCTTAACCATAGTTC 244 >seq4859 Length=1423 Score = 302 bits (334), Expect = 1e-79 Identities = 302/392 (77%), Gaps = 36/392 (9%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||||| || | | | ||||||| |||||| ||| |||||||||| | || ||||| Sbjct 752 GCATCTTTACTCGTACTGCAATTTCGCCGAGTTTATGGTTGAGACAGCGGGGAAGTCGTT 693 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || || ||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 692 ACTCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 633 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCG-----ATTGCTCTAACA 181 ||||||| ||||||||||||||||||||| ||| | |||||| | || ||||| Sbjct 632 TAGTTACCACCGCCGTTTACTGGGGCTTAAATTCTCAGCTTCGCCACAAGTG-GCTAACC 574 Query 182 GATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTG-CGACT 240 | ||| |||||||||||||||||||||||| ||||| | |||||||| ||||| ||||| Sbjct 573 GGTCCTCTTAACCTTCCAGCACCGGGCAGGAGTCAGTCCGTATACATC-TCTTGTCGACT 515 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC------ 294 | ||| ||||| |||| | ||||||||||||| ||| ||||||||||| Sbjct 514 TCGCACGGACCTGGTTTTTAGTTAAACAGTCGCTTCCCCCTGGTCTCTGCGGCCCACACC 455 Query 295 ---------------TGT---CAT----AGACAGGCACCCCTTCTCCCTAAGTTACGGGG 332 || ||| | ||||| ||||||||||| ||||||||||| Sbjct 454 CGCTCACGGAGAGCAAGTCTCCATCACGGGGCAGGCCCCCCTTCTCCCGAAGTTACGGGG 395 Query 333 TCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364 ||||||||||||||||||||| ||| ||||| Sbjct 394 GCATTTTGCCGAGTTCCTTAACCATAATTCTC 363 >seq1010 Length=5412 Score = 293 bits (324), Expect = 5e-77 Identities = 291/374 (78%), Gaps = 21/374 (6%) Strand=Plus/Plus Query 2 ACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAA 61 |||| |||||||||| |||| | ||||||||| |||||||| | ||||||| | || Sbjct 394 ACCCCGCATCTTCACGGGGAATTCAATTTCACTGAGTCTATGTTGGAGACAGCGGGGAAG 453 Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 454 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 513 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACA 181 |||||||||||||||||||||||||| |||||| |||| || |||| || Sbjct 514 CGTTATAGTTACGGCCGCCGTTTACT-GGGCTTCGATTCAAGGC-----TTGC----ACC 563 Query 182 GATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241 ||| ||||||||||| |||||||||||||||||| ||||||| || |||||||| || Sbjct 564 TCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCATCTTGCGATTT 623 Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTG------CGGC-- 293 ||||| |||||||||||| |||||||| || ||| ||| || |||| Sbjct 624 CGCAGAGCCCTGTGTTTTTGTTAAACAGTTGCCACCCCCTGGTCTGTGCCCCCACGGCAC 683 Query 294 -CT--GTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCT 350 || ||| | || | |||| |||| ||||||||| | | ||||||||||||| Sbjct 684 GCTTGCGCATGCAGTGGGCCTCCTTATCCCGAAGTTACGGAGGTAAATTGCCGAGTTCCT 743 Query 351 TAACAATAGTTCTC 364 | | ||||||||| Sbjct 744 TCAACATAGTTCTC 757 >seq6592 Length=1011 Score = 288 bits (318), Expect = 2e-75 Identities = 302/396 (76%), Gaps = 32/396 (8%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGT-GCCCA 59 || || |||||||||| || | || |||||||||| ||| | |||||||||| ||||| Sbjct 403 TAACCTGCATCTTCACAGGTACTAAAATTTCACCGGATCTCTCGTTGAGACAGCCGCCCA 462 Query 60 AATCGTTACGCCTTT-CGT-GCGGGTCGGAACTTACCCGACAAGG-AATTTCG-CTACCT 115 | |||||||||| || ||| ||||||| ||| ||||| ||||||| ||||||| |||||| Sbjct 463 AGTCGTTACGCCATTACGTCGCGGGTCAGAATTTACCTGACAAGGGAATTTCGTCTACCT 522 Query 116 TAGG-ACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGC 174 |||| ||||||||||||||||||||||||||||||||||| | |||| ||||| |||| Sbjct 523 TAGGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCAAAGCTTCTCTTGC 582 Query 175 TCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTT 234 |||| ||| |||||||||||||||||||||||||||||| | ||||| || ||| Sbjct 583 GATAACCTCTCCTTTTAACCTTCCAGCACCGGGCAGGCGTCAGCCCATATACTTCCACTT 642 Query 235 GCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC 294 || || ||| | ||||||||||||| |||||||||||| ||| ||| ||||| || Sbjct 643 ACGTGTTTGCATAGACCTGTGTTTTTGATAAACAGTCGCTACCCCCTTTTCACTGCGACC 702 Query 295 TGTCATAG--------------------------ACAGGCACCCCTTCTCCCTAAGTTAC 328 | |||| | |||| ||||||||| ||||||| Sbjct 703 TCCAATAGCTTGACCAGCAAGTGATCTCACCATCAAAGGCGTGCCTTCTCCCGAAGTTAC 762 Query 329 GGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364 || || ||||| |||||||||||||| ||||||| Sbjct 763 GGCACCAATTTGCAGAGTTCCTTAACAAGAGTTCTC 798 >seq962 Length=5977 Score = 277 bits (306), Expect = 4e-72 Identities = 288/379 (76%), Gaps = 24/379 (6%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | || | ||||||| | ||| | | | ||||||||| || Sbjct 1415 TACTCCGCATCTTCACGGAGAATTCAATTTCGCTGAGCATGTCCTGGAGACAGTGGGGAA 1474 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1475 GTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 1534 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||| |||||| | ||| || |||| || Sbjct 1535 CCGTTATAGTTACGGCCGCCGTTTACCTGGGCTTCATTTCGGAGC-----TTGC----AC 1585 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTG----C 236 ||| |||||||||| |||||||||||||||||| ||||||| |||||||| | Sbjct 1586 CCCTCCACTTAACCTTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTGAAGCC 1645 Query 237 GACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTG 296 ||||||||||| |||||||||||| |||||||||||| ||| || ||| |||| Sbjct 1646 GACTTAGCAGAGCCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGTGCCCCCTG 1705 Query 297 -----------TCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAG 345 || ||||| | |||||| || ||| ||||| | || ||||||||| Sbjct 1706 CTACTGCTTGCGCAATAACAGGGCCTCCTTCTTCCGAAGGTACGGAGGCAATTTGCCGAG 1765 Query 346 TTCCTTAACAATAGTTCTC 364 |||||| | | | ||||| Sbjct 1766 TTCCTTCAGGACACTTCTC 1784 >seq6569 Length=1015 Score = 257 bits (284), Expect = 4e-66 Identities = 220/269 (82%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | |||| ||||||||| |||||| || ||||||| ||| ||||| Sbjct 747 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCTGTCGTT 806 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 807 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 866 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCG-ATTGC-TCTAACAGAT 184 |||||||||||||||||||| ||||||| | | |||||| |||| || || Sbjct 867 TAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCCTTGCGGCTGACCCCA 926 Query 185 CCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGC 244 | |||||||||||||||||||||||||||| ||||||| || ||| || || || Sbjct 927 TCAATTAACCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGC 986 Query 245 AGAAACCTGTGTTTTTGGTAAACAGTCGC 273 ||| ||||||||||| ||||||||||| Sbjct 987 AGAGTGCTGTGTTTTTGATAAACAGTCGC 1015 >seq1316 Length=3583 Score = 181 bits (200), Expect = 2e-43 Identities = 176/223 (79%), Gaps = 10/223 (4%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||| |||| ||| ||| ||| | |||||| | ||||||||| |||||| Sbjct 2699 GCATCATCACAAACATTTCAACTTCGCTGAGTCTCGGGAGGAGACAGTGTGGCCATCGTT 2640 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2639 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 2580 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 |||||||||||||||||||||||| ||| | | | || |||| | | || | Sbjct 2579 TAGTTACGGCCGCCGTTTACTGGGACTTCAATCAAGAGC-----TTGC---ACCCCAT-C 2529 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATC 229 |||| ||||||||||||||| ||||||| | ||||||| || Sbjct 2528 ATTTAATCTTCCAGCACCGGGCCGGCGTCA-CCCCTATACGTC 2487 Score = 105 bits (116), Expect = 1e-20 Identities = 183/269 (68%), Gaps = 34/269 (13%) Strand=Plus/Minus Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||||||| ||| | | | |||| | | | | | Sbjct 2468 CCGTTATAGTTACGGCCGCCGTTTACTGGGACTTCAATCAAGAGCTTGCA---CCCCATC 2412 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 | |||| ||||||||||||||||||||||| ||||||| || ||| || | Sbjct 2411 AT------TTAATCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 2358 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGC---------- 290 | ||||| |||||||||| ||||||||||| || ||| | ||| Sbjct 2357 TTGCAGAGTGCTGTGTTTTTATTAAACAGTCGCAGCCACCGATTTTTTGCAACCCCGTTG 2298 Query 291 GGCCTGTCATAGACAGG--CACC-------------CCTTCTCCCTAAGTTACGGGGTCA 335 ||| | | | ||||| |||| ||||||||| ||||||||| ||| Sbjct 2297 GGCTCGCCTTGTACAGGTTCACCTACTTAGGGCATACCTTCTCCCGAAGTTACGGTATCA 2238 Query 336 TTTTGCCGAGTTCCTTAACAATAGTTCTC 364 ||||||||||||||| | ||||||| Sbjct 2237 ATTTGCCGAGTTCCTTCTCCTGAGTTCTC 2209 >seq1613 Length=112029 Score = 132 bits (146), Expect = 1e-28 Identities = 111/135 (82%), Gaps = 6/135 (4%) Strand=Plus/Minus Query 4 CCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCC----CA 59 |||| ||||||||||| | || ||||||| ||| || ||||| ||||||| | Sbjct 54811 CCGGTATCTTCACCGGTACTAAGATTTCACTGAGCTTACAGTTGAAACAGTGCATGCACG 54752 Query 60 AATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 119 |||||||||||||||| |||||||| ||||||| | ||||||||||||||||||||| || Sbjct 54751 AATCGTTACGCCTTTCATGCGGGTCAGAACTTAGCTGACAAGGAATTTCGCTACCTTTGG 54692 Query 120 ACCGTTATAGTTACG 134 ||||| |||||||| Sbjct 54691 ACCGT--TAGTTACG 54679 >seq949 Length=6172 Score = 122 bits (134), Expect = 2e-25 Identities = 116/146 (79%), Gaps = 3/146 (2%) Strand=Plus/Plus Query 209 AGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACA 268 ||| ||||| | ||||| || |||| ||| || ||| | | |||||||||| |||||| Sbjct 2094 AGGTGTCAGGCCTTATACTTCATCTTTCGATTTTGCAAAGCCATGTGTTTTTGTTAAACA 2153 Query 269 GTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG--ACAGGCACCCCTTCTCCCTAAGTT 326 ||||| ||||||| ||| |||||| ||| || | | || ||||||||||| ||||| Sbjct 2154 GTCGCCTGGGCCTTTTCACTGCGG-CTGATATTGCTGCCAGCGCCCCTTCTCCCGAAGTT 2212 Query 327 ACGGGGTCATTTTGCCGAGTTCCTTA 352 || ||| ||||||||||||||||||| Sbjct 2213 ACAGGGCCATTTTGCCGAGTTCCTTA 2238 >seq2403 Length=69003 Score = 113 bits (124), Expect = 1e-22 Identities = 128/175 (73%), Gaps = 24/175 (14%) Strand=Plus/Minus Query 212 CGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTC 271 |||||| | |||||||||||||||||||| ||| |||||||||||| |||||||||| Sbjct 8667 CGTCAGTCCATATACATCGTCTTGCGACTTCGCATGGACCTGTGTTTTTAGTAAACAGTC 8608 Query 272 GCTTGGGCCTATTCTCTGCGGCC----TGTCATAG------ACAGGC------------- 308 |||| || ||||||||||| | | ||| | |||| Sbjct 8607 GCTTCTCGCTGGTCTCTGCGGCCGTCTCGCCCTAGCCTGCAAGAGGCTTCAAGCGCTACG 8548 Query 309 -ACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTC 362 ||||||||||| ||||||||||| ||||||||||||||||||||| | ||||| Sbjct 8547 GCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGCCGAGTTCCTTAACCACAGTTC 8493 Score = 86.0 bits (94), Expect = 1e-14 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 306 GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTC 362 ||| ||||||||||| ||||||||||| ||||||||||||||||||||| ||||||| Sbjct 6343 GGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGCCGAGTTCCTTAACCATAGTTC 6287 >seq2264 Length=278406 Score = 82.4 bits (90), Expect = 2e-13 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 49 GACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTC 108 ||||||| | ||||| || |||||||| ||||| | ||| ||||| ||| |||| Sbjct 245759 GACAGTGGGAATCTCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTG 245818 Query 109 GCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAA 156 ||||||||| || || |||||||| ||||||||||| | |||||| Sbjct 245819 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTAA 245866 Score = 82.4 bits (90), Expect = 2e-13 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 49 GACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTC 108 ||||||| | ||||| || |||||||| ||||| | ||| ||||| ||| |||| Sbjct 258463 GACAGTGGGAATCTCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTG 258522 Query 109 GCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAA 156 ||||||||| || || |||||||| ||||||||||| | |||||| Sbjct 258523 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTAA 258570 Score = 82.4 bits (90), Expect = 2e-13 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 49 GACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTC 108 ||||||| | ||||| || |||||||| ||||| | ||| ||||| ||| |||| Sbjct 266472 GACAGTGGGAATCTCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTG 266531 Query 109 GCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAA 156 ||||||||| || || |||||||| ||||||||||| | |||||| Sbjct 266532 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTAA 266579 >seq5890 Length=1118 Score = 80.6 bits (88), Expect = 6e-13 Identities = 106/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 462 ATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 403 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 402 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 344 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154 |||| ||||||| || || |||| || Sbjct 343 GTTAAGGCCGCCTTTAACCGGGGGTT 318 >seq1489 Length=2939 Score = 80.6 bits (88), Expect = 6e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 306 GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTC 362 ||| ||||||||||||||||||||||| || |||||||||||||||||| | ||||| Sbjct 2893 GGCCCCCCTTCTCCCTAAGTTACGGGGGCAATTTGCCGAGTTCCTTAACCACAGTTC 2837 >seq887 Length=599721 Score = 80.6 bits (88), Expect = 6e-13 Identities = 71/89 (80%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 68 CGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTAT 127 ||||| |||||| ||||| | ||| ||||| ||| |||| ||||||||| || || || Sbjct 414 CGCCTCCCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 355 Query 128 AGTTACGGCCGCCGTTTACTGGGGCTTAA 156 |||||| ||||||||||| | |||||| Sbjct 354 AGTTACTCCCGCCGTTTACCCGCGCTTAA 326 >seq101 Length=23353 Score = 80.6 bits (88), Expect = 6e-13 Identities = 106/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||||| || | ||||||| |||||||| Sbjct 22132 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 22073 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | | Sbjct 22072 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 22014 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154 |||| ||||||| || || |||| || Sbjct 22013 GTTAAGGCCGCCTTTAACCGGGGTTT 21988 >seq1117 Length=4599 Score = 78.8 bits (86), Expect = 2e-12 Identities = 67/83 (81%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 74 TCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTAC 133 ||||||| ||||| | ||| ||||| ||| |||| ||||||||| || || |||||||| Sbjct 4123 TCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTAC 4182 Query 134 GGCCGCCGTTTACTGGGGCTTAA 156 ||||||||||| | |||||| Sbjct 4183 TCCCGCCGTTTACCCGCGCTTAA 4205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062326981248