Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20pallida_20[genbank_20GCA_5F000724045.1_202014-05-30] 6,873 sequences; 123,625,196 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq1316 524 3e-146 seq949 439 8e-121 seq2682 360 6e-97 seq2677 351 3e-94 seq1010 284 4e-74 seq2403 273 7e-71 seq1489 260 5e-67 seq5356 188 2e-45 >seq1316 Length=3583 Score = 524 bits (580), Expect = 3e-146 Identities = 421/500 (84%), Gaps = 15/500 (3%) Strand=Plus/Plus Query 1 TCGAGTCCGAACAGGGCGA-CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct 1198 TCGAGTCCGAATAGGGCGTTCAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTATCCA 1257 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 |||||||||||||||||| |||||| | ||||||||||||||| |||| ||||| |||| Sbjct 1258 TGGCCAGGATGAAGGTGCCGTAACAGGTACTGGAGGTCCGAACCGACTAGTGTTGCAAAA 1317 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1318 CTAGCGGATGAGCTGTGGATAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 1377 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATG 239 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct 1378 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATTACCATCGGGGGTAGAGCACTGTTTAG 1437 Query 240 GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTAC 299 ||||||||||||| ||||||||||||||| |||||||||||||| | || || ||| Sbjct 1438 GCTAGGGGGTCATGGCGACTTACCAAACCTATGCAAACTCCGAATACCGATGAG---TAC 1494 Query 300 CGC--GGGAGTGAGGGCA-TGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 || ||||| || ||| ||||||||| ||||| | | ||||| || || || ||| Sbjct 1495 AGCTTGGGAGACAGAGCACCGGGTGCTAACGTCCGGACACAAGAGGGAAACAACCCAGAC 1554 Query 357 TATCAGCTAAGGCCCCGAAA--TGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAG 414 ||||||||| ||| ||| || ||||||| | |||||||| || ||||| Sbjct 1555 CGCCAGCTAAGGTCCCTAAAATTG---GCTAAGTGGGA--AACGAAGTGGGAAGGCTAAA 1609 Query 415 ACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTA 474 |||| ||||||||||||| |||||||||| ||||||||||| |||||| |||||||| Sbjct 1610 ACAGTCAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAATAGCTCACTG 1668 Query 475 GTCGAGGAGTCGGGCGTGGA 494 ||||| ||| ||| ||| Sbjct 1669 ATCGAGTCGTCCTGCGCGGA 1688 >seq949 Length=6172 Score = 439 bits (486), Expect = 8e-121 Identities = 444/565 (79%), Gaps = 11/565 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCG-ACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| |||||| | |||| || |||||| ||||||| ||||||||||||| Sbjct 3269 CGAGTCTGAATAGGGCGTATAGTCAGGGGAGGTAGACGCGAAACCTTGTGATCTACCCAT 3210 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 || |||| |||||||||||||||||| ||||||| ||||||| | || |||||||| | Sbjct 3209 GGACAGGTTGAAGGTGCGGTAACACGTACTGGAGGACCGAACCGATAAACGTTGAAAAGT 3150 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 | |||||| |||||||||||||||||||||||| |||||| |||||||||| || ||| Sbjct 3149 TTCCGGATGATCTGTGGGTAGGGGTGAAAGGCTAATCAAACTGGGAAATAGCTCGTACTC 3090 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACC-ATCGGG-GGTAGAGC-ACTGTTA 237 |||||| | |||||| | || | | | | ||| | |||||||| |||| | Sbjct 3089 CCCGAAATGTTTTTAGGAACAGCGTGGTGGTTAAGTTATCTAGAGGTAGAGCTACTGAT- 3031 Query 238 TGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTT 297 ||| | |||| | | ||||||| | |||||||||||||| | | | | Sbjct 3030 TGGGTGCGGGGGAGTCAAATCCTACCAAATCCAGACAAACTCCGAATGCTATTTAATATA 2971 Query 298 ACCGCGGGAGTGAGGGCATGGGTGCTAAGGTC-CGTGCCCGAGAGGAGAAGAATCCGGAC 356 | ||| ||||||| ||||||||||||| || ||| |||||| ||||| || ||| Sbjct 2970 --CACGGCAGTGAGGCGCGGGGTGCTAAGGTCACGCGCC-GAGAGGGAAAGAACCCAGAC 2914 Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416 ||||||||||| ||| || | |||| |||||| ||||||||| ||| |||||| |||| Sbjct 2913 CATCAGCTAAGGTCCCCAAGTTACAGTTAAGTTGAACTAACGAGGTCCGATTGCATAGAC 2854 Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2853 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 2794 Query 477 CGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGG-ATC 535 |||| |||||| |||||||||| |||| ||||| ||| |||||||| |||| | Sbjct 2793 CGAGCGATCGGGCATGGATAATAAACGGGCATTAAACTGTACACCGAAGCTATGGGTAAT 2734 Query 536 ATTTATATGATCGGTAGGGGAGCAT 560 ||| |||| | |||||||||||||| Sbjct 2733 ATTAATATTA-CGGTAGGGGAGCAT 2710 >seq2682 Length=265177 Score = 360 bits (398), Expect = 6e-97 Identities = 430/569 (76%), Gaps = 15/569 (3%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| ||||||| |||| ||| |||||| |||||| ||||||||||| | Sbjct 14813 CGAGTCTGAATAGGGCGATTAGTCAGTGGCCGTAGACGCGAAACTTTGTGATCTACCCTT 14754 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | ||||| ||||| |||||||| | |||||| ||||||| || |||||||| | Sbjct 14753 GACCAGGTTGAAGCGCTGGTAACACATCGTGGAGGACCGAACCGGTAAACGTTGAAAAGT 14694 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 | ||||||| || ||||||||||||||||| || |||||| ||||||||| || ||| Sbjct 14693 TTTCGGATGAGTTGAGGGTAGGGGTGAAAGGCCAATCAAACTGAGAAATAGCTCGTACTC 14634 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC-CATCGGG-GGTAGAGC-ACTGTTA 237 |||||| | |||||| | || | | | | ||| |||||||| |||| || Sbjct 14633 CCCGAAATGTTTTTAGGAACAGCGTTGTGGTTGAGTCATGTTCAGGTAGAGCTACTGATA 14574 Query 238 TGGCTAGGGGGTCATTGCGA-CTTACCAAACCATTGCAAACTCCGAATGCG-CATCAGTT 295 | |||||||| | | | | ||||||| | ||||||||||||| | ||| | | Sbjct 14573 GGACTAGGGGG--AGTCAAATCCTACCAAATTCTGACAAACTCCGAATGGGGCATGA--T 14518 Query 296 TTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGA 355 ||| ||| ||||||||| |||||||||||||| | |||||||| ||| || || || Sbjct 14517 ATACA-CGGCAGTGAGGGCTGGGGTGCTAAGGTCCCAGTCCGAGAGGGGAACAACCCAGA 14459 Query 356 CTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGA 415 ||||||||||| ||| |||| |||||||| |||||| | ||| || ||| ||| Sbjct 14458 GCATCAGCTAAGGTCCCAAAATATATGCTAAGTTGAACTAAGGGGGTCCGACTGCAGAGA 14399 Query 416 CAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAG 475 |||| |||||||| ||||||||||||| || ||||||||||||||||||||||||||| | Sbjct 14398 CAGCCAGGATGTTAGCTTGGAAGCAGCTATACATTTAAAGAGTGCGTAACAGCTCACTGG 14339 Query 476 TCGAG-GAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGAT 534 ||||| | | ||||| | |||||||| |||| || ||| ||||||||| || ||| Sbjct 14338 TCGAGCGGGGCGGGCATCGATAATAAACGGGCATCAAGCATATTACCGAAGCTATGCGAT 14279 Query 535 --CATTTATA-TGATCGGTAGGGGAGCAT 560 ||||||| |||||||||||||||| Sbjct 14278 TGTATTTATACATATCGGTAGGGGAGCAT 14250 >seq2677 Length=1202 Score = 351 bits (388), Expect = 3e-94 Identities = 405/536 (76%), Gaps = 21/536 (4%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCG-ACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| |||||| | |||| |||| |||||| |||||| ||||||||||| | Sbjct 645 CGAGTCTGAATAGGGCGCATAGTCAGTGGGAGTAGACGCGAAACTTTGTGATCTACCCTT 704 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 || |||||||||| | |||||||||| ||||||||||||| || |||||||| | Sbjct 705 GGTCAGGATGAAGTTCCGGTAACACGGGATGGAGGTCCGAACTAGTAAACGTTGAAAAGT 764 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 | |||||| ||| |||||||||||||||||||| |||||| ||||||||| || ||| Sbjct 765 TTTTGGATGAACTGAGGGTAGGGGTGAAAGGCTAATCAAACTGAGAAATAGCTCGTACTC 824 Query 181 TCCGAAAACTATTTAGGTA----GTGCC--TCAAGTATCACCATCGGGGGTAGAGC-ACT 233 |||||| | |||||| | ||| | |||| | || |||||||| || Sbjct 825 CCCGAAATGTTTTTAGGAACAGTGTGGAGGTTAAGTTT----ATTACAGGTAGAGCTACC 880 Query 234 GTTATGGCTAGGGGG--TCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATC 291 || | |||||||| ||| | | ||||||| | | ||||||||||| || Sbjct 881 AATAGGACTAGGGGGAGTCA---CATCCTACCAAATCCTGATGAACTCCGAATGGTAATA 937 Query 292 AGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATC 351 | | | | | | | |||||||||||||||||||||||||| |||||||| ||||| | Sbjct 938 AATATA--CTCTGCAATGAGGGCATGGGTGCTAAGGTCCGTGTCCGAGAGGGAAAGAACC 995 Query 352 CGGACTATCAGCTAAGGCCCCGAAAT-GACAGCTAAGTTAAACTAACGAAGTCTGATTGC 410 | ||| ||||||||| ||| |||| ||| ||||||| |||||| | || |||| Sbjct 996 CAGACCTGCAGCTAAGGTCCCAAAATCTACA-CTAAGTTGAACTAAGGCGGTTCAGTTGC 1054 Query 411 TAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTC 470 | ||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct 1055 TTAGACAGCCAGGATGTTTGCTTGGAAGCAGCAATTCATTTAAAGAGTGCGTAACAGCTC 1114 Query 471 ACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGC 526 ||| |||||| | || | ||||||||||||| || |||| ||||||||| Sbjct 1115 ACTGGTCGAGCGACAGAGCATCGATAATAATCGGGCATCAAGTGTAGTACCGAAGC 1170 >seq1010 Length=5412 Score = 284 bits (314), Expect = 4e-74 Identities = 360/484 (74%), Gaps = 17/484 (4%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAG--TCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| ||| |||||| || ||| || | ||||||||||||| ||||||||| ||| Sbjct 1676 CGAGTCTGAATAGGGCGTCAAGTTCGTTGTAT-TAGACCCGAAACCTAGTGATCTAGCCA 1618 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 || |||| |||||||| |||||||| | ||||||| |||||| |||||||||| Sbjct 1617 TGAGCAGGTTGAAGGTGAGGTAACACTCACTGGAGGACCGAACGGGTGTCTGTTGAAAAA 1558 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 ||||| ||||| |||||||||||||| || |||||| |||||||||||||||| Sbjct 1557 GACTCCGATGACTTGTGGTTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTGGTTCT 1498 Query 180 CTCCGAAAACTATTTAGGTAGTGCCT--CAAGTATCACCATC--GGGGGTAGAGCACTGT 235 | ||||| |||||||||| |||| || | || | || ||||||||||||||| Sbjct 1497 CCGCGAAAGATATTTAGGTATCGCCTCGCATGAAT--GCTTCGGGGGGGTAGAGCACTGG 1440 Query 236 TATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTT 295 |||||||||| | | || ||||||||||| |||||||||||| | | || Sbjct 1439 ATGGGCTAGGGGGACTTACCGTCTTACCAAACCCAACCAAACTCCGAATACCCGAAAGCA 1380 Query 296 TTACCGCGGGAGT--GAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCG 353 || |||||||| | ||| ||||||||| |||||| |||||| || || ||| Sbjct 1379 ATA-TGCGGGAGTCACACGGC--GGGTGCTAACGTCCGTCGTGGAGAGGGAAACAACCCG 1323 Query 354 GACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAA 413 ||| ||||||||||||| || | ||||||| | || || || | | | || Sbjct 1322 GACCTACAGCTAAGGCCCCTAATTCGTGGCTAAGTGGGA--AAGGATGTGGAAATCCCAA 1265 Query 414 GACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 473 ||| | |||| |||||||| |||||||||| || |||||||| ||||||||||||||| Sbjct 1264 AACAACCAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAAAGCGTAACAGCTCACT 1206 Query 474 AGTC 477 ||| Sbjct 1205 GGTC 1202 >seq2403 Length=69003 Score = 273 bits (302), Expect = 7e-71 Identities = 396/545 (73%), Gaps = 17/545 (3%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| ||| |||||| |||||| ||| |||||||||| | |||||||| ||| Sbjct 7373 CGAGTCTGAATAGGGCGCTTGAGTCGCGTGGTCTAGACCCGAAGCGGTGTGATCTAGCCA 7432 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 |||||||| ||||| ||||| || | |||||| |||||||||| | |||||||| Sbjct 7433 TGGCCAGGGTGAAGCGCGGGTAAGACCGCGTGGAGGCCCGAACCCACCAGGGTTGAAAAC 7492 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 | ||||||||||||||| |||||||||||||| || ||||| | |||||||||||| Sbjct 7493 CTGGGGGATGAGCTGTGGTTAGGGGTGAAAGGCCAATCAAACACCGTGATAGCTGGTTCT 7552 Query 180 CTCCGAAAACTATTTAGGT--AGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTA 237 | |||||| |||||||| || | | || |||||| |||||||||||||||| | Sbjct 7553 CCCCGAAATGCATTTAGGTGCAGCGTCGTGTGTTTCACCA-CGGGGGTAGAGCACTG-GA 7610 Query 238 TGG-CTAGGGGGTCATTGCGACTTACC-AAACCATTGCAAACTCCGAATGCGCATCAGTT 295 ||| |||||||| | | |||||| ||| || |||||||||||| | | || Sbjct 7611 TGGTCTAGGGGGCCCACAAG-CTTACCGAAATCA-ACCAAACTCCGAATACCGAGGTGTG 7668 Query 296 TTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGA 355 | ||||| |||||| ||| | |||| | ||| ||||||| || | || || Sbjct 7669 AGAGCGCGGCAGTGAGACTGCGGGGGATAAGCTTCGTAGTCGAGAGGGAAACAGCCCAGA 7728 Query 356 CTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGA 415 ||||||||| ||| || || ||||||| | || || || | | || ||| Sbjct 7729 ACGCCAGCTAAGGTCCCTAAGTGTGTGCTAAGTGGGA--AAGGATGTGGGGTCGCACAGA 7786 Query 416 CAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAG 475 |||| |||| |||||||| |||||||||| | |||||||||||||||| |||||||| | Sbjct 7787 CAGCCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTTAAAGAGTGCGTAATAGCTCACTGG 7845 Query 476 TCGAGGAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGAT 534 || || ||| ||| || ||| | |||| ||||| | |||||||| ||| | Sbjct 7846 TCAAGTGGTCCTGCGCCGACAATGTAGCGGGGCTTAAGCACACCACCGAAGCTGTG---T 7902 Query 535 CATTT 539 ||||| Sbjct 7903 CATTT 7907 Score = 244 bits (270), Expect = 4e-62 Identities = 349/483 (72%), Gaps = 9/483 (2%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGA--CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 ||||||||||||||||| |||| || | | ||||||||| | ||||||||| ||| Sbjct 5157 CGAGTCCGAACAGGGCGTTTCAGTAGCACGCTCAAGACCCGAAGCGGAGTGATCTAGCCA 5216 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 ||| |||| ||||| | ||||| || | |||||| |||||||||| | |||||||| Sbjct 5217 TGGGCAGGTTGAAGCGGAGGTAAGACTTCGTGGAGGACCGAACCCACCAGGGTTGAAAAC 5276 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 | |||||||| |||||| |||||||||||||| || |||||| | |||||||||||| Sbjct 5277 CTGGGGGATGACCTGTGGTTAGGGGTGAAAGGCCAATCAAACTCCGTGATAGCTGGTTCT 5336 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC-CATCGGGGGTAGAGCACTGTTAT 238 | |||||| |||||||| || || || | | ||| |||||||||||| Sbjct 5337 CCCCGAAATGCATTTAGGTGCAGCGTCGTGTGTTTCTTGCCGGAGGTAGAGCACTGGATA 5396 Query 239 GGCTAGGGGGTCATTGCGACTTACCAAACCATTG-CAAACTCCGAATGCGCATCAGTTTT 297 ||| | ||| | | || ||| | ||| | | |||||||||||||| | ||| Sbjct 5397 GGCGA-TGGGCCCTACCGGGTTA-CTGACCTTAGCCAAACTCCGAATGCCGGTAAGTGAG 5454 Query 298 ACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357 | ||||| |||||| |||| | |||| ||| || ||||||| || | || || Sbjct 5455 AGCGCGGCAGTGAGACTGTGGGGGATAAGCTCCATGGTCGAGAGGGAAACAGCCCAGAGC 5514 Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 ||| |||||||||| || | ||||||| | || || || | || ||||| Sbjct 5515 ATCGACTAAGGCCCCTAAGCGTACGCTAAGTGGGA--AAGGATGTGGAGTCGCAGAGACA 5572 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 | |||| |||||||| |||||||||| | || ||||||||||||| |||||||| ||| Sbjct 5573 ACCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCACTGGTC 5631 Query 478 GAG 480 || Sbjct 5632 TAG 5634 >seq1489 Length=2939 Score = 260 bits (288), Expect = 5e-67 Identities = 357/485 (74%), Gaps = 13/485 (3%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCG--ACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| ||| |||||| | |||||| | | |||||||||| | |||||||| ||| Sbjct 1694 CGAGTCTGAAGAGGGCGCTATAGTCGCATGTTCTAGACCCGAAGCGGGGTGATCTAGCCA 1753 Query 60 TGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118 ||| |||| ||||| ||| ||||| || | |||||| |||||||||| || |||||||| Sbjct 1754 TGGGCAGGTTGAAGCGTG-GGTAAGACTGCGTGGAGGACCGAACCCACCAACGTTGAAAA 1812 Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178 || |||||||| |||||| |||||||||||||| || |||||| | ||||||||||| Sbjct 1813 GTTGGGGGATGACCTGTGGTTAGGGGTGAAAGGCCAATCAAACTCCGTGATAGCTGGTTC 1872 Query 179 TCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC-CATCGGGGGTAGAGCACTGTTA 237 || |||||| |||||||| || || || | | ||| |||||||||||| | Sbjct 1873 TCCCCGAAATGCATTTAGGTGCAGCGTCGCGTGTTTCTTGCCGGAGGTAGAGCACTG-GA 1931 Query 238 TGG-CTAGGGGGTCATTGCGACTTAC-CAAACCATTGCAAACTCCGAATGCGCATCAGTT 295 ||| |||||||| | | ||||| ||| || |||||||||||||| | ||| Sbjct 1932 TGGTCTAGGGGGCCCACAAG-CTTACTGAAATCA-GCCAAACTCCGAATGCCGGTAAGTG 1989 Query 296 TTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGA 355 | ||||| |||||| ||| | |||| | ||| ||||||| || | || || Sbjct 1990 AGAGCGCGGCAGTGAGACTGCGGGGGATAAGCTTCGTAGTCGAGAGGGAAACAGCCCAGA 2049 Query 356 CTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGA 415 ||||||||||||| || | ||||||| || || || || ||| || || Sbjct 2050 TCGCCAGCTAAGGCCCCTAAGCGTGTGCTAAGTGGAA--AAGGATGTGGGATCGCATGGA 2107 Query 416 CAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAG 475 || | |||| |||||||| |||||||||| | |||||||||||||||| |||||||| | Sbjct 2108 CAACCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTTAAAGAGTGCGTAATAGCTCACTGG 2166 Query 476 TCGAG 480 || || Sbjct 2167 TCAAG 2171 >seq5356 Length=1236 Score = 188 bits (208), Expect = 2e-45 Identities = 256/349 (73%), Gaps = 10/349 (3%) Strand=Plus/Minus Query 133 TGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTAT 192 ||||| |||||||||||||| || |||||| ||| ||||||||||||| ||||| |||| Sbjct 1234 TGTGGCTAGGGGTGAAAGGCCAATCAAACTCGGAGATAGCTGGTTCTCCGCGAAATCTAT 1175 Query 193 TTAGGTAGTGCCTCAA--GTATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTC 250 |||||||| || || | | || ||| ||||||||||||||||| ||||| |||| | Sbjct 1174 TTAGGTAGAGCGTCGACCGAAT-ACCCTCGGGGGTAGAGCACTGGATGGGCTATGGGGAC 1116 Query 251 ATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTA-CCGCGGGAGTG 309 || ||||| | || |||||||||||| | | ||| || || || Sbjct 1115 TCACCGTCTTACTGATCCTAACCAAACTCCGAATACCGAGGAGTACTAGTCGGCAGACAC 1056 Query 310 AGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGC 369 | ||| ||||||||| |||||| ||||| || || || ||| ||||||||| Sbjct 1055 ACGGC--GGGTGCTAACGTCCGTCGTGAAGAGGGCAACAACCCTGACCTCCAGCTAAGGT 998 Query 370 CCCGAAATGACAGCTAAGTTAAACTAACGAAGT-CTGATTGCTAAGACAGCTAGGATGTT 428 ||| || | | ||||||| | || || || ||| | || ||| | |||||||| Sbjct 997 CCCCAAGTCATGGCTAAGTGGGA--AAGGATGTGAGGATCCCAAAAACAACCAGGATGTT 940 Query 429 GGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 ||||| |||||||||| ||||||||||| ||||||||||||||| ||| Sbjct 939 GGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAACAGCTCACTGGTC 892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689483873792