Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20pallida_20[genbank_20GCA_5F000724045.1_202014-05-30] 6,873 sequences; 123,625,196 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq5365 670 0.0 seq4859 657 0.0 seq1010 408 1e-111 seq6592 374 3e-101 seq6569 367 4e-99 seq962 333 9e-89 seq2682 331 3e-88 seq1316 316 7e-84 seq5356 264 4e-68 seq2403 188 2e-45 seq949 170 7e-40 seq1613 86.0 2e-14 seq2264 78.8 3e-12 >seq5365 Length=1235 Score = 670 bits (742), Expect = 0.0 Identities = 490/565 (87%), Gaps = 3/565 (1%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || ||||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct 967 TCGACCCGTCGGTCTCACAGTCAAGCTCCCTTGTGCACTTACACTCAACACCTGATTGCC 908 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||| Sbjct 907 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTAGGAGG-CAACCGCCCCAG 849 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 |||||||||||| ||| ||||||||| | || ||||| || || |||||||| ||||| Sbjct 848 TTAAACTACCCATCAGACACTGTCCCTGATCCGGATCACGGACCCAGGTTAGACATCCAG 789 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 ||| |||| |||||||||||| |||||||||| ||| |||| || ||| ||| Sbjct 788 CACGACCAGACTGGTATTTCAACGACGACTCCACCTGAACTGGCGTCCAAGCTTCAAAGT 729 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 |||||| ||||||||||||| ||| |||||| |||||| ||| || |||| |||||||| Sbjct 728 CTCCCAGCTATCCTACACAAGCCGAACCGAACACCAATATCAAACTGTAGTAAAGGTCCC 669 Query 301 GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGG 360 ||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct 668 GGGGTCTTTCCGTCCTGCTGCGCGAAACGAGCATCTTTACTCGTAGTGCAATTTCACCGG 609 Query 361 GCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 420 |||| |||||||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct 608 GCCTATGGTTGAGACAGTCGAGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 549 Query 421 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCA 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct 548 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGCGCTTAA 489 Query 481 ATTACCCGCCTCACACACCACGTGGTGTG-CTCACGAGTCCTCTTAACCTTCCAGCACCG 539 || | || || | ||| || |||| || || |||| |||||| ||||||||||| Sbjct 488 GTTCTCAGCTTCGC-CACACCGAAATGTGACTAACCGGTCCCCTTAACGTTCCAGCACCG 430 Query 540 GGCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||||||||||||| ||| Sbjct 429 GGCAGGCGTCAGTCCGTATACATCG 405 >seq4859 Length=1423 Score = 657 bits (728), Expect = 0.0 Identities = 479/551 (87%), Gaps = 7/551 (1%) Strand=Plus/Minus Query 13 TCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACCAGGCTGAG 72 |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1069 TCTCACAGTCAAGCTCCCTTGTGCACTTACACTCGACACCTGATTGCCAACCAGGCTGAG 1010 Query 73 GGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCA 132 |||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||| Sbjct 1009 GGAACCTTTGGGCGCCTCCGTTACTTTTTAGGAGG-CAACCGCCCCAGTTAAACTACCCA 951 Query 133 CCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGT 192 ||||||||||||| |||| ||||| ||||| | ||||||| |||| | |||||| Sbjct 950 TCAGGCACTGTCCCTGACCCGGATCACGGGCCGAAGTTAGATGTCCAAAGTGACCAGAGT 891 Query 193 GGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTATC 252 ||||||||||| | |||||||| ||| |||| | ||| |||||||||||||| Sbjct 890 GGTATTTCAACGATGACTCCACCCGAACTGGCGTCCGGGTTTCAACGTCTCCCACCTATC 831 Query 253 CTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCCGGGGTCTTTTCG 312 |||||||| || | ||||| |||||||||| ||||||| |||||| |||||||||| || Sbjct 830 CTACACAAGCCACTCCGAACACCAATACCAAACTATAGTAAAGGTCTCGGGGTCTTTCCG 771 Query 313 TCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGA 372 |||||| ||||| |||||||||||||||||||||||||||||| ||| | | ||||||| Sbjct 770 TCCTGCTGCGCGTAACGAGCATCTTTACTCGTACTGCAATTTCGCCGAGTTTATGGTTGA 711 Query 373 GACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 432 |||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 710 GACAGCGGGGAAGTCGTTACTCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 651 Query 433 GCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTC 492 |||||||||||||||||||||||||||||||||||||||||||||| |||| | || || Sbjct 650 GCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTAAATTCTCAGCTTC 591 Query 493 ACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGT 552 | || || ||| ||| || ||||||||||||||||||||||||||||| |||||| Sbjct 590 GC-CA-CAAGTG----GCTAACCGGTCCTCTTAACCTTCCAGCACCGGGCAGGAGTCAGT 537 Query 553 CCGTATACCTC 563 |||||||| || Sbjct 536 CCGTATACATC 526 >seq1010 Length=5412 Score = 408 bits (452), Expect = 1e-111 Identities = 435/566 (77%), Gaps = 26/566 (5%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 ||||||||| ||||||||||||| || ||| ||| || ||||| || ||| |||| | Sbjct 69 TCGACTTGTCAGTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCGACGACC-GATTTC 127 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 | ||| | ||||| ||| | | ||||||||||||| ||| ||||| | ||||||||| Sbjct 128 CGACCGGTCTGAGCCCACCATCGCGCGCCTCCGTTACTCTTTCGGAGG-CGACCGCCCCA 186 Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCA 179 || ||||||||||||| ||||||||| | || ||| | || || ||||||| ||||| Sbjct 187 GTCAAACTACCCACCATACACTGTCCCGGATCCGGATAACGGACCGCGGTTAGACATCCA 246 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 | | | | || |||||||||||| | | |||||||| ||| |||| | || ||| | Sbjct 247 CGAAGATAAGGGTGGTATTTCAAGGATGGCTCCACAAGAACTGGCGTCCCTGCTTCAAAC 306 Query 240 TCTCCCACCTA-TCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTC 298 || ||||||| ||||||||| || ||||||||| | |||||||||| ||||| Sbjct 307 -CTACCACCTACTCCTACACATGCCTTGGCGAATGCCAGTGTAAAGCTATAGTAAAGGTG 365 Query 299 C-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357 | |||||||||| |||| |||| ||| | ||||||| || | | | ||||||||| Sbjct 366 CACGGGGTCTTTCCGTCTGACCGCAGGAACCCCGCATCTTCACGGGGAATTCAATTTCAC 425 Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | | || || | |||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 426 TGAGTCTATGTTGGAGACAGCGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 485 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| Sbjct 486 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACT-GGGCT 544 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537 || ||| | | || ||| ||| ||||||||||||||| |||| Sbjct 545 TCGATT-CAAGGCTTGCAC-------------CTC-----TCCTCTTAACCTTCCGGCAC 585 Query 538 CGGGCAGGCGTCAGTCCGTATACCTC 563 |||||||||||||| || ||||| || Sbjct 586 CGGGCAGGCGTCAGACCCTATACGTC 611 >seq6592 Length=1011 Score = 374 bits (414), Expect = 3e-101 Identities = 431/570 (76%), Gaps = 20/570 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||||||||| |||||||||||||||||| | ||| || ||||| | | |||| || Sbjct 81 TCGACTTGTAGGTCTCGCAGTCAAGCTCC--TATGCCTTTGCACTCTGCGCGCGATTTCC 138 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||| |||||||||||||| | ||||||||||||| ||| ||||| | |||||||||| Sbjct 139 AACCGCGCTGAGGGAACCTTAGAGCGCCTCCGTTACTCTTTAGGAGG-CGACCGCCCCAG 197 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||| || || | ||| ||||| || | | | || |||||||| ||| Sbjct 198 TCAAACTGTCCGCCTGACACGGTCCCTCTACCGGTTAACGGTAGTAGGTTAGAACTCCGA 257 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 |||| |||| ||||||| |||| || ||||||| || ||| | || |||||| Sbjct 258 TACGATCAGGGTGGTATCCCAACGGCGCCTCCACAGAAGCTTGCGCTCCTGCTTCATAGG 317 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC- 299 |||||||||||||| ||| |||| ||| || ||||| ||||||| ||| ||| ||| Sbjct 318 CTCCCACCTATCCTGTACAGACCGTACCAAAGTTCAATATCAAGCTACAGTAAAGCTCCA 377 Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 ||||||||| |||| | |||| | ||| ||||||| || ||||| |||||||||| Sbjct 378 TGGGGTCTTTCCGTCACGTCGCGGGTAACCTGCATCTTCACAGGTACTAAAATTTCACCG 437 Query 360 GGCCTGTGGTTGAGACAGCAG-GGGAGTCGTTACGCCATT-CGT-GCAGGTCGGAACTTA 416 | || | ||||||||||| | ||||||||||||||| ||| || |||| ||| ||| Sbjct 438 GATCTCTCGTTGAGACAGCCGCCCAAGTCGTTACGCCATTACGTCGCGGGTCAGAATTTA 497 Query 417 CCCGACAA-GGAATTTCG-CTACCTTA-GGATGGTTATAGTTACCACCGCCGTTTACTGG 473 || ||||| ||||||||| |||||||| ||| ||||||||||| |||||||||||||| Sbjct 498 CCTGACAAGGGAATTTCGTCTACCTTAGGGACCGTTATAGTTACGGCCGCCGTTTACTGG 557 Query 474 GGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCA 533 |||||||||| || | | | || | | || |||| ||||||||||| Sbjct 558 GGCTTCAATT----------CAAAGCTTCTCTTGCGATAACCTCTCCTTTTAACCTTCCA 607 Query 534 GCACCGGGCAGGCGTCAGTCCGTATACCTC 563 |||||||||||||||||| || ||||| || Sbjct 608 GCACCGGGCAGGCGTCAGCCCATATACTTC 637 >seq6569 Length=1015 Score = 367 bits (406), Expect = 4e-99 Identities = 419/554 (76%), Gaps = 14/554 (3%) Strand=Plus/Plus Query 13 TCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACCAGGCTGAG 72 ||| |||||||||| | ||| ||| || ||| || | ||| || ||| |||||| Sbjct 429 TCTTGCAGTCAAGCACGCTTATGCCTTTGCACACAGTGCGCGATGTCCGACCGCGCTGAG 488 Query 73 GGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCA 132 | ||||| | || |||||||||| ||| ||||| | |||||||||| |||||||||| Sbjct 489 CGTACCTTCGAGCTCCTCCGTTACTCTTTAGGAGGAGA-CCGCCCCAGTCAAACTACCCA 547 Query 133 CCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATA-TCCACTACGGTCAGAG 191 ||| ||| |||||| |||||||| ||||||| |||||||| || | ||| ||| | Sbjct 548 CCATACACGGTCCCCGACCCAGATAATGGGCCCAGGTTAGAACGTCAAGCACGA-CAGGG 606 Query 192 TGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTAT 251 ||||||||||| | | |||||| | |||||| | | |||||| ||||||||||| Sbjct 607 TGGTATTTCAAGGATGGCTCCACTGCAGCTAGCGCCACAGTTTCATAGCCTCCCACCTAT 666 Query 252 CCTACACAAACCGCACCGAATGC-CAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTT 309 |||||||| || | || || | || | |||||||||| ||||| | |||||||||| Sbjct 667 CCTACACAGAC-GAACTCAACGTTCAGTGTAAAGCTATAGTAAAGGTTCACGGGGTCTTT 725 Query 310 TCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGT 369 |||| ||||||| ||| ||||||| || | | ||||||||| | | || ||| Sbjct 726 CCGTCTTGCCGCGGGAACGCTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGT 785 Query 370 TGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 429 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 786 GGAGACAGCGCCGCTGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 845 Query 430 TTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGC 489 ||||||||||||||| ||||||||||| ||||||||||| |||||||| || | || Sbjct 846 TTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC 905 Query 490 CTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTC 549 || | | || ||| || | ||||||||||||||||||||||||||| Sbjct 906 TTCGC------CTTG--CGGCTGACCCCATCAATTAACCTTCCAGCACCGGGCAGGCGTC 957 Query 550 AGTCCGTATACCTC 563 | || ||||| || Sbjct 958 ACACCCTATACGTC 971 >seq962 Length=5977 Score = 333 bits (368), Expect = 9e-89 Identities = 414/566 (73%), Gaps = 22/566 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 ||||||||| ||||||||||||| ||| ||| ||| || ||||| | || | | || | Sbjct 1090 TCGACTTGTCAGTCTCGCAGTCAGGCTGGCTTATGCCATTGCACTCTAACAGCCGGTTTC 1149 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 ||||| | ||||| |||||| | ||||||||||||| ||| ||||| | ||||||||| Sbjct 1150 CAACCGGCCTGAGCCAACCTTCGCGCGCCTCCGTTACTCTTTAGGAGG-CGACCGCCCCA 1208 Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCA 179 || ||||||||| ||| | ||||| || ||| | || | ||||||| ||| Sbjct 1209 GTCAAACTACCCGCCACAGAGGGTCCCAGCACCGGATAACGGTGCGTGGTTAGACATCAG 1268 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 | ||| ||||||||||| | | | ||||||| | || ||| || ||| || Sbjct 1269 AAAACAACAGGGTGGTATTTCACCTATGGCTCCACACCGGCTGGCGCCAATGCTTCAAAG 1328 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 ||||||||||| ||||||| | || ||||||| | ||||| ||| ||||| | Sbjct 1329 CCTCCCACCTATGCTACACAGTTCTTTCCTAATGCCACTCTGAAGCTGCAGTAAAGGTGC 1388 Query 300 -CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 |||||||||| |||| ||||| | | ||||||| || | | ||||||| | Sbjct 1389 ACGGGGTCTTTCCGTCTAACCGCGGGTACTCCGCATCTTCACGGAGAATTCAATTTCGCT 1448 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418 | || ||| | ||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 1449 GAGCATGTCCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 1508 Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| Sbjct 1509 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCTGGGCTT 1568 Query 479 CAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACC 538 || || || | || ||| ||| |||||||||| ||||| Sbjct 1569 CATTT-----------------CGGAGCTTG--CACCCCTCCACTTAACCTTCAGGCACC 1609 Query 539 GGGCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||||| || ||||| ||| Sbjct 1610 GGGCAGGCGTCAGGCCCTATACGTCG 1635 >seq2682 Length=265177 Score = 331 bits (366), Expect = 3e-88 Identities = 418/566 (74%), Gaps = 24/566 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || ||||||||||||||| ||||| | || ||||| ||| | || || Sbjct 13168 TCGACCCGTCGGTCTCGCAGTCAAGCCTGCTTGTACTATTGCACTCCACACACGGTTACC 13227 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | | |||| |||||||| |||||||||||| ||| ||||| | ||| |||||| Sbjct 13228 AAGCGTGTTGAGCAGACCTTTGGAAGCCTCCGTTACACTTTTGGAGG-CGACCACCCCAG 13286 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||||||||||| |||| |||| | || || | || ||||||| ||| Sbjct 13287 TCAAACTACCCACCATGCACGGTCCTG--CTCA---CAAGAGCA---GTTAGATC-CCAG 13337 Query 181 TACGGTCA-GAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 | | | | ||||||||||||| | |||| ||| || ||| ||| |||| || Sbjct 13338 GCCAGCGAAGGGTGGTATTTCAACGTTGGCTCCTGAACGCCTGGCGACGCCCAATCACAG 13397 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 ||||||||||||||||||| || ||| | |||| | |||||||||| ||||| | Sbjct 13398 CCTCCCACCTATCCTACACATCCCTGACCCGAAAACAATGCAAAGCTATAGTAAAGGTGC 13457 Query 300 -CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 |||||||||| ||||| | ||| | || ||||||| || |||| |||||||||| Sbjct 13458 ACGGGGTCTTTCCGTCCCGTGGCGGGTAAGCGGCATCTTCACCGCTACTACAATTTCACC 13517 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | || || ||||||| | || ||||||| |||||||||||||||||||||||| Sbjct 13518 GAGCTCACGGCCGAGACAGT-GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTAC 13576 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 13577 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCT 13636 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537 || ||| || || | || | | || ||||||||||||||||||| Sbjct 13637 TCGATTCAATGCTTC----------TCTTGCGATGACATCCCCTCTTAACCTTCCAGCAC 13686 Query 538 CGGGCAGGCGTCAGTCCGTATACCTC 563 |||||||| ||||| || ||||| || Sbjct 13687 CGGGCAGGTGTCAGGCCCTATACGTC 13712 >seq1316 Length=3583 Score = 316 bits (350), Expect = 7e-84 Identities = 364/485 (75%), Gaps = 6/485 (1%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC--ACCACCTGATTG 58 ||||||||| |||||||||| |||| | ||| ||| || |||| | ||| ||| Sbjct 3029 TCGACTTGTCGGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTATTAGCAC--GATGT 2972 Query 59 CCAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCC 118 || ||| | || | ||||| | | ||||||||||| ||| ||||| | ||||||| Sbjct 2971 CCGACCGTACCTAGCGTACCTTCGAACTCCTCCGTTACACTTTAGGAGGAGA-CCGCCCC 2913 Query 119 AGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCC 178 ||| ||||| || |||| ||||||||||| | || ||||| |||||||||||||| | Sbjct 2912 AGTCAAACTGCCTACCATGCACTGTCCCCGATCCGGATCACGGGCCAAGGTTAGAACCTC 2853 Query 179 ACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATA 238 | ||| |||||||||||| | |||||| | ||| |||| |||| ||| | Sbjct 2852 AAACAAACCAGGGTGGTATTTCAAGGTTGGCTCCACGAGAACTGGCGTCCCCGCTTCAAA 2793 Query 239 GTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTC 298 | ||||||||||||||||||| | | | || ||||| | |||||| ||| ||||| Sbjct 2792 GCCTCCCACCTATCCTACACAGATTGGTTCAAAGTCCAATGCAAAGCTACAGTAAAGGTT 2733 Query 299 CC-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357 | ||||||||| |||| |||||| | | ||||| | || | | ||| ||| | Sbjct 2732 CATGGGGTCTTTCCGTCTAGCCGCGGGTAGATTGCATCATCACAAACATTTCAACTTCGC 2673 Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | | || || ||||||| || |||||||||||||||||||||||||||||||| Sbjct 2672 TGAGTCTCGGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTAC 2613 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| || Sbjct 2612 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACT 2553 Query 478 TCAAT 482 ||||| Sbjct 2552 TCAAT 2548 >seq5356 Length=1236 Score = 264 bits (292), Expect = 4e-68 Identities = 253/325 (78%), Gaps = 22/325 (7%) Strand=Plus/Plus Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC- 299 || |||||||||||||||| ||| ||||||||| | |||||||||| ||||| | Sbjct 2 CTACCACCTATCCTACACATGCCGACACGAATGCCAGTGTAAAGCTATAGTAAAGGTGCA 61 Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 |||||||||| |||| |||| ||| | ||||||| || | | | ||||||||| | Sbjct 62 CGGGGTCTTTCCGTCTAACCGCAGGAACCCCGCATCTTCACGGGGAATTCAATTTCACTG 121 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 | || || | |||||||| ||| ||||||||| |||||||||||||||||||||||||| Sbjct 122 AGTCTATGTTGGAGACAGCGGGGAAGTCGTTACACCATTCGTGCAGGTCGGAACTTACCC 181 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 182 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 241 Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539 || || | | | ||| |||||||||||||||||||||| Sbjct 242 --TT----------CAAAGCTTG---------CACCTCTCCTCTTAACCTTCCAGCACCG 280 Query 540 GGCAGGCGTCAGTCCGTATACCTCG 564 |||||||||||| || ||||| ||| Sbjct 281 GGCAGGCGTCAGACCCTATACGTCG 305 >seq2403 Length=69003 Score = 188 bits (208), Expect = 2e-45 Identities = 117/124 (94%), Gaps = 1/124 (1%) Strand=Plus/Minus Query 13 TCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACCAGGCTGAG 72 |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 8947 TCTCACAGTCAAGCTCCCTTGTGCACTTACACTCGACACCTGATTGCCAACCAGGCTGAG 8888 Query 73 GGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCA 132 |||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||| Sbjct 8887 GGAACCTTTGGGCGCCTCCGTTACTTTTTAGGA-GGCAACCGCCCCAGTTAAACTACCCA 8829 Query 133 CCAG 136 ||| Sbjct 8828 TCAG 8825 >seq949 Length=6172 Score = 170 bits (188), Expect = 7e-40 Identities = 229/316 (72%), Gaps = 11/316 (3%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||||||||| ||||| ||||||||| ||| ||| || ||||| || | || || Sbjct 757 TCGACTTGTATGTCTCACAGTCAAGCAAGCTTATGCTATTGCACTCCTCATACGGTTACC 816 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | |||| ||||||| ||||||||||| |||| ||||| | ||| |||||| Sbjct 817 AAGCGTATTGAGCTTACCTTTGAAAGCCTCCGTTACCTTTTTGGAGG-CGACCACCCCAG 875 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | |||||||||| || || ||||| || || || | |||||| | | | Sbjct 876 TCAAACTACCCATCAAACAATGTCCTTCACTGAG----TG-----AAGTTAGACACCGAA 926 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 ||| | || ||||||||||||| |||||||| || || ||| ||||| ||||||| Sbjct 927 TACAGAAAGGGTGGTATTTCAACGTTGACTCCACGACGCCTGGCGACGCCGCTTCATAGT 986 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGT-CC 299 ||||||||||||||||||| | | | | |||| |||| || | |||||||||| | Sbjct 987 CTCCCACCTATCCTACACATCCTGTATCCAATGTCAATGTTAAATTGTAGTGAAGGTGCA 1046 Query 300 CGGGGTCTTTTCGTCC 315 ||||||||| ||||| Sbjct 1047 TGGGGTCTTTCCGTCC 1062 >seq1613 Length=112029 Score = 86.0 bits (94), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 6/137 (4%) Strand=Plus/Minus Query 325 AAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAG--CAGGG 382 |||| | ||||| || ||||| ||||||| | || | ||||| |||| || | Sbjct 54814 AAACCGGTATCTTCACCGGTACTAAGATTTCACTGAGCTTACAGTTGAAACAGTGCATGC 54755 Query 383 --GAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTT 440 || |||||||||| ||| ||| |||| ||||||| | ||||||||||||||||||||| Sbjct 54754 ACGAATCGTTACGCCTTTCATGCGGGTCAGAACTTAGCTGACAAGGAATTTCGCTACCTT 54695 Query 441 AGGATGGTTATAGTTAC 457 ||| || ||||||| Sbjct 54694 TGGACCGT--TAGTTAC 54680 >seq2264 Length=278406 Score = 78.8 bits (86), Expect = 3e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 245772 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 245831 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 || |||||||| ||||||||||| | |||| Sbjct 245832 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 245864 Score = 78.8 bits (86), Expect = 3e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 258476 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 258535 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 || |||||||| ||||||||||| | |||| Sbjct 258536 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 258568 Score = 78.8 bits (86), Expect = 3e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 266485 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 266544 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 || |||||||| ||||||||||| | |||| Sbjct 266545 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 266577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702282994048