Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20pallida_20[genbank_20GCA_5F000724045.1_202014-05-30] 6,873 sequences; 123,625,196 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq269 116 3e-21 >seq269 Length=200655 Score = 116 bits (128), Expect = 3e-21 Identities = 121/159 (76%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 66004 AAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAAT 66063 ||| |||| || || | |||||| ||||| |||| || || | | ||| || | || Sbjct 149915 AAGCGCAATGGAGGCCAAGTTGCACACAGCGGTCTCATCCGGTGACGAATATTCAATGAT 149974 Query 66064 TTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATT 66123 ||||||||||| ||| ||| |||||||||||| || || ||||| ||| ||||| Sbjct 149975 TTCGGTGCACAAATTTGAGCATTTTATGGTGCCCAAGTTTTGCTGATTTGACTTCCGATT 150034 Query 66124 GCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTC 66162 ||| || |||||| ||| ||||||||| ||||||||||| Sbjct 150035 GCACGCGTCCTTGAACAACATGTACGGCGTGCCGGTCTC 150073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397534697840720