Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25] 128,401 sequences; 322,334,493 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq15381 86.0 1e-14 seq6258 86.0 1e-14 seq5973 86.0 1e-14 seq64333 80.6 5e-13 >seq15381 Length=5133 Score = 86.0 bits (94), Expect = 1e-14 Identities = 60/66 (91%), Gaps = 2/66 (3%) Strand=Plus/Minus Query 104 GAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCT 163 |||||| ||| |||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct 1122 GAAGTT-GAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCTAGGGCTGCACGCGCGCT 1065 Query 164 ACACTG 169 |||||| Sbjct 1064 ACACTG 1059 >seq6258 Length=8591 Score = 86.0 bits (94), Expect = 1e-14 Identities = 82/100 (82%), Gaps = 5/100 (5%) Strand=Plus/Plus Query 73 TTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||||||| | ||| | ||| | |||||| ||| ||||||||||||||||| Sbjct 7991 TTCTTAGAGGGACAAGCGGTGCTTAGCAGCATGAAGTT-GAG-CAATAACAGGTCTGTGA 8048 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCG--CTACACTG 169 ||||| ||||||| | |||| ||||||||| |||||||| Sbjct 8049 TGCCCGTAGATGTCCAGGGCTGCACGCGCGCTCTACACTG 8088 >seq5973 Length=8797 Score = 86.0 bits (94), Expect = 1e-14 Identities = 65/74 (88%), Gaps = 2/74 (3%) Strand=Plus/Plus Query 96 AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCA 155 ||||| |||||| ||| || ||||||||||||||||||||||||||| | |||| ||| Sbjct 2497 AGCCGCATGAAGTT-GAG-CAGTAACAGGTCTGTGATGCCCTTAGATGTCCAGGGCTGCA 2554 Query 156 CGCGCGCTACACTG 169 |||||||||||||| Sbjct 2555 CGCGCGCTACACTG 2568 >seq64333 Length=1315 Score = 80.6 bits (88), Expect = 5e-13 Identities = 71/89 (80%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 230 CGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCG 289 |||| | || || | | |||||||||||| | ||| |||||||||| |||||||| | | Sbjct 1311 CGTGATCGGAATCGGGAATTGCAATTATTTCCCTTGAACGAGGAATTCCTAGTAAATGTG 1252 Query 290 TGTCATCAGCACGCGTTGATTACGTCCCT 318 | ||||||| | ||||||||| |||||| Sbjct 1251 AGCCATCAGCTCACGTTGATTAAGTCCCT 1223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 945983785728