Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25] 128,401 sequences; 322,334,493 total letters Query= NC_033261.1 Length=10841 Score E Sequences producing significant alignments: (Bits) Value seq24343 87.8 1e-13 >seq24343 Length=3642 Score = 87.8 bits (96), Expect = 1e-13 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 6278 ATCAAGGAGGAAGAAACGTGGTCATCACGAACATCATTTGCGTATAGCAAAGACTACTAT 6337 || |||| || | ||| ||||| || | || |||||| | |||||||| ||||| ||| Sbjct 2076 ATAAAGGCAGATGCAACTTGGTCGTCCAGGACTTCATTTCCATATAGCAAGGACTATTAT 2017 Query 6338 ATATGTGGAAAACCCATGCCCATGTCATTGAAGAAAGGCTCTCGAATGTTTCACTTAGCA 6397 || || || || | ||||| || || | ||| || || ||||||| || ||||| Sbjct 2016 ATTTGCGGTAAGTCAATGCCTATTTCTATTAAGGTTGGGTCAAGAATGTTCCATCTAGCA 1957 Query 6398 AATGAGGATTATCCGTCTTTG 6418 || || ||||||||||||||| Sbjct 1956 AACGAAGATTATCCGTCTTTG 1936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34526054579020