Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20placei_20[genbank_20GCA_5F000951295.1_202014-09-26] 24,923 sequences; 259,125,910 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq15955 102 5e-20 >seq15955 Length=1132 Score = 102 bits (112), Expect = 5e-20 Identities = 81/91 (89%), Gaps = 5/91 (5%) Strand=Plus/Minus Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91 ||||||| ||||| | | ||||||||||||| || ||||||||| ||||||||||| ||| Sbjct 538 AGCCAAT-CCGAAGGAT-TCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 483 Query 92 TACAAAGGGCAGGGACGTAATACAACGCAAG 122 ||||||||||||||||||||| |||||| || Sbjct 482 TACAAAGGGCAGGGACGTAAT-CAACGCGAG 453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300729717140