Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haemonchus_20placei_20[genbank_20GCA_5F000951295.1_202014-09-26]
24,923 sequences; 259,125,910 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq15955 102 5e-20
>seq15955
Length=1132
Score = 102 bits (112), Expect = 5e-20
Identities = 81/91 (89%), Gaps = 5/91 (5%)
Strand=Plus/Minus
Query 32 AGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG 91
||||||| ||||| | | ||||||||||||| || ||||||||| ||||||||||| |||
Sbjct 538 AGCCAAT-CCGAAGGAT-TCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTG 483
Query 92 TACAAAGGGCAGGGACGTAATACAACGCAAG 122
||||||||||||||||||||| |||||| ||
Sbjct 482 TACAAAGGGCAGGGACGTAAT-CAACGCGAG 453
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300729717140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |