Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haemonchus_20placei_20[genbank_20GCA_5F000951295.1_202014-09-26]
24,923 sequences; 259,125,910 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq15955 149 7e-34
>seq15955
Length=1132
Score = 149 bits (164), Expect = 7e-34
Identities = 113/131 (86%), Gaps = 2/131 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| || | ||||||||||||||||||||||||||||||||
Sbjct 788 CTAGAAACCAACAAAATAGA-ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATTCA 730
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| |||||||||||| |||||||||||||| |||| ||||||||||| | || | | |
Sbjct 729 AGCATAAGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAAAAGTCCTAGATCGCCAGTA 670
Query 126 CAC-CAATGAA 135
||| |||||||
Sbjct 669 CACACAATGAA 659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595056293982
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |