Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20placei_20[genbank_20GCA_5F000951295.1_202014-09-26] 24,923 sequences; 259,125,910 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq15955 149 7e-34 >seq15955 Length=1132 Score = 149 bits (164), Expect = 7e-34 Identities = 113/131 (86%), Gaps = 2/131 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| || | |||||||||||||||||||||||||||||||| Sbjct 788 CTAGAAACCAACAAAATAGA-ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATTCA 730 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || |||||||||||| |||||||||||||| |||| ||||||||||| | || | | | Sbjct 729 AGCATAAGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAAAAGTCCTAGATCGCCAGTA 670 Query 126 CAC-CAATGAA 135 ||| ||||||| Sbjct 669 CACACAATGAA 659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595056293982