Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20placei_20[genbank_20GCA_5F000951295.1_202014-09-26] 24,923 sequences; 259,125,910 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq8765 140 3e-31 >seq8765 Length=4561 Score = 140 bits (154), Expect = 3e-31 Identities = 121/150 (81%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||| ||| |||||| | ||||| ||| || ||||||| ||||| ||||||||||||| Sbjct 1004 TCGGGTTCCAGACTCCGATCCGAACTGAGACGCACTTTCATGGATTGGCTCCCCCTCGCG 945 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || | || ||||||||| || |||||||| ||||||| ||||| |||||||||| Sbjct 944 GGGTCGCTGCCCTCTGTGTGCGCCATTGTAGCACGTGTGTAGCCCCGGACATAAGGGCCG 885 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC 150 || || ||||||||||||||||||||||| Sbjct 884 TGCTGATTTGACGTCATCCCCACCTTCCTC 855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415899560310