Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haemonchus_20placei_20[genbank_20GCA_5F000951295.1_202014-09-26]
24,923 sequences; 259,125,910 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq15955 226 3e-57
>seq15955
Length=1132
Score = 226 bits (250), Expect = 3e-57
Identities = 162/184 (88%), Gaps = 2/184 (1%)
Strand=Plus/Plus
Query 7 AGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTAC 66
||||||||||||||||||||||||||| ||| ||||||||| | |||| ||||||||||
Sbjct 682 AGGACTTTTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCTTATGCTTGAATACATTAG 741
Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126
||||||||||||||||||||| | ||||||||||||| |||||||||||||| ||||
Sbjct 742 CATGGAATAATAGAATAGGAC-TTTGGTTCTATTTTGTTGGTTTCTAGGACCG-AAGTAA 799
Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186
|||| |||| ||||||| ||||| | |||||| |||||||| ||||||||||||| |||
Sbjct 800 TGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTCTTAGAT 859
Query 187 TTAT 190
||||
Sbjct 860 TTAT 863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511876381920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |