Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20placei_20[genbank_20GCA_5F000951295.1_202014-09-26] 24,923 sequences; 259,125,910 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3288 111 1e-19 >seq3288 Length=24717 Score = 111 bits (122), Expect = 1e-19 Identities = 151/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 66426 ACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGC 66485 |||| || ||||| |||||||| |||||||||||||| ||||||| ||| || || Sbjct 15815 ACTCGAAAATGTCAGCATGCCACGGTTCCAGGTAGATTGCGAACGCTCCCGGGCGCTTAT 15756 Query 66486 CGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCC 66545 || |||||||| ||||| || || || ||| | || || | |||||| | | | Sbjct 15755 TACCGCCTTGGTCCACGTAACGCGCAGTGTTATTGTACACGCGAAGCATCGGAATCAAGC 15696 Query 66546 CGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACAT 66605 | || ||| ||||||| || || | || | ||||| ||| | |||| || || | Sbjct 15695 CATTGGATGTGCCATTTGTTCCCGCAATCAGCGATCCAGTTGCTCTGATATTATGCACGT 15636 Query 66606 TCAGACCAATACCACCGGCCGTCTTCGAGAT 66636 ||||||| || || ||||| |||||||||| Sbjct 15635 TCAGACCTATTCCGCCGGCACTCTTCGAGAT 15605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397447239092720