Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heligmosomoides_20polygyrus_20bakeri_20[genbank_20GCA_5F900096555.1_
202016-09-19] 23,647 sequences; 696,954,138 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq4823 95.1 6e-18
seq3757 95.1 6e-18
seq584 95.1 6e-18
seq334 95.1 6e-18
seq206 95.1 6e-18
seq1017 89.7 2e-16
seq2783 86.0 3e-15
seq982 86.0 3e-15
seq1930 80.6 1e-13
seq11700 77.0 1e-12
seq4 77.0 1e-12
seq9200 75.2 5e-12
seq546 71.6 6e-11
>seq4823
Length=25678
Score = 95.1 bits (104), Expect = 6e-18
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| |||||||||| ||||||||||||||||| |||| |||||||||
Sbjct 8967 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAACGGGGAGAAGCCCAGCG 9026
Query 61 CCGAATC 67
| |||||
Sbjct 9027 CTGAATC 9033
>seq3757
Length=45963
Score = 95.1 bits (104), Expect = 6e-18
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| |||||||||| ||||||||||||||||| |||| |||||||||
Sbjct 14758 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAACGGGGAGAAGCCCAGCG 14817
Query 61 CCGAATC 67
| |||||
Sbjct 14818 CTGAATC 14824
>seq584
Length=263741
Score = 95.1 bits (104), Expect = 6e-18
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| |||||||||| ||||||||||||||||| |||| |||||||||
Sbjct 151226 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAACGGGGAGAAGCCCAGCG 151167
Query 61 CCGAATC 67
| |||||
Sbjct 151166 CTGAATC 151160
>seq334
Length=329709
Score = 95.1 bits (104), Expect = 6e-18
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| |||||||||| ||||||||||||||||| |||| |||||||||
Sbjct 318528 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAACGGGGAGAAGCCCAGCG 318587
Query 61 CCGAATC 67
| |||||
Sbjct 318588 CTGAATC 318594
>seq206
Length=388919
Score = 95.1 bits (104), Expect = 6e-18
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| |||||||||| ||||||||||||||||| |||| |||||||||
Sbjct 145161 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAACGGGGAGAAGCCCAGCG 145220
Query 61 CCGAATC 67
| |||||
Sbjct 145221 CTGAATC 145227
>seq1017
Length=190417
Score = 89.7 bits (98), Expect = 2e-16
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| ||||||| || ||||||||||||||||| |||| |||||||||
Sbjct 127499 GGAAAAGAAACTAACAAGGATTCTCTTAGTAACGGCGAGTGAACGGGGAGAAGCCCAGCG 127440
Query 61 CCGAATC 67
| |||||
Sbjct 127439 CTGAATC 127433
>seq2783
Length=75324
Score = 86.0 bits (94), Expect = 3e-15
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62
||||||||||||| |||||||||| ||||||||||||||||| | || ||||||||||
Sbjct 7933 AAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAACGGAGAGAAGCCCAGCGCT 7874
Query 63 GAATC 67
|||||
Sbjct 7873 GAATC 7869
>seq982
Length=194932
Score = 86.0 bits (94), Expect = 3e-15
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| |||||||||| ||| ||||||||||||| |||| ||| |||||
Sbjct 151053 GGAAAAGAAACTAACAAGGATTCCCTTAGTGACGGCGAGTGAACGGGGAGAAGCTCAGCG 150994
Query 61 CCGAATC 67
| |||||
Sbjct 150993 CTGAATC 150987
>seq1930
Length=114119
Score = 80.6 bits (88), Expect = 1e-13
Identities = 58/67 (87%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||| ||||||||| |||||||| | ||||||||||||||||| |||| ||| |||||
Sbjct 49544 GGAAAGGAAACTAACAAGGATTCCATTAGTAACGGCGAGTGAACGGGGAGAAGCGCAGCG 49485
Query 61 CCGAATC 67
| |||||
Sbjct 49484 CTGAATC 49478
>seq11700
Length=1310
Score = 77.0 bits (84), Expect = 1e-12
Identities = 57/67 (85%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| |||||||||| ||| |||||||||||| |||| ||| ||||
Sbjct 752 GGAAAAGAAACTAACAAGGATTCCCTTAGTGGCGGCGAGTGAACGGGGAGAAGCTCAGCA 811
Query 61 CCGAATC 67
| |||||
Sbjct 812 CTGAATC 818
>seq4
Length=1026473
Score = 77.0 bits (84), Expect = 1e-12
Identities = 58/67 (87%), Gaps = 1/67 (1%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| |||||||||| |||||||||||||||| ||| ||| | ||||
Sbjct 1001928 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAA-TGGGGAGAAGCTAGCG 1001986
Query 61 CCGAATC 67
| |||||
Sbjct 1001987 CTGAATC 1001993
>seq9200
Length=2974
Score = 75.2 bits (82), Expect = 5e-12
Identities = 59/68 (87%), Gaps = 2/68 (3%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAG-AGCCCAGC 59
|||||||||||||| |||||||||| |||| ||||||||||| |||||| |||||| |
Sbjct 2169 GGAAAAGAAACTAATAAGGATTCCCTTGGTAATGGCGAGTGAAC-GGGAAGAAGCCCAAC 2111
Query 60 GCCGAATC 67
|| |||||
Sbjct 2110 GCGGAATC 2103
>seq546
Length=271221
Score = 71.6 bits (78), Expect = 6e-11
Identities = 56/67 (84%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|| |||||||| ||| |||||||||| |||| ||||||||||| ||| |||||||||
Sbjct 89624 GGTAAAGAAACCAACAAGGATTCCCTTGGTAATGGCGAGTGAACGAGGAGAAGCCCAGCG 89565
Query 61 CCGAATC 67
| |||||
Sbjct 89564 CGGAATC 89558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230348922480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |