Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heligmosomoides_20polygyrus_20bakeri_20[genbank_20GCA_5F900096555.1_
202016-09-19] 23,647 sequences; 696,954,138 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq926 351 2e-94
seq9026 349 6e-94
seq1017 329 6e-88
seq1777 325 7e-87
seq206 313 4e-83
seq982 291 1e-76
seq3177 262 7e-68
seq4139 255 1e-65
seq5586 248 1e-63
seq2984 246 5e-63
seq627 192 1e-46
seq169 143 5e-32
seq1020 138 2e-30
seq6996 118 2e-24
seq2577 109 9e-22
seq550 95.1 2e-17
seq265 86.0 1e-14
seq1691 78.8 2e-12
seq389 75.2 2e-11
>seq926
Length=201871
Score = 351 bits (388), Expect = 2e-94
Identities = 257/295 (87%), Gaps = 3/295 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||||||| | ||||| || | | | |||| ||||||||||||| |||||||||||
Sbjct 38232 TACTAAGCAGGATTACTATCGCAACAATTAGTCAACAGTAGGGTAAAAGTAACCTGTCTC 38173
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 38172 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGCG 38113
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 38112 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 38053
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|| | ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 38052 TGGATGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTACC 37993
Query 240 TCAAATTTCGAGGGACT-AAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
||| | ||| | |||||||||||||||||| ||||| ||| |||| ||
Sbjct 37992 AGAAA-CCATATGGATTAAAAGGATCGATAGGCCACGCTTTCTCGGTCTGTACTC 37939
>seq9026
Length=3182
Score = 349 bits (386), Expect = 6e-94
Identities = 238/265 (90%), Gaps = 2/265 (1%)
Strand=Plus/Minus
Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
|||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct 859 GTCAACAGTAGGGTAAAAGTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 800
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 799 ATTAGTGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCG 740
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct 739 ACATCGAAGGATCAAAAAGCAACGTCGCTATGGATGCTTGGCTGCCACAAGCCAGTTATC 680
Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACT-AAAGGATCGATA 268
|||||||||||||||||| ||||||| || ||| | ||| | ||||||||||||
Sbjct 679 CCTGTGGTAACTTTTCTGACACCTCTTACCAGAAA-CCATATGGATTAAAAGGATCGATA 621
Query 269 GGCCACACTTTCATGGTTTGTATTC 293
|||||| ||||| ||| |||| ||
Sbjct 620 GGCCACGCTTTCTCGGTCTGTACTC 596
>seq1017
Length=190417
Score = 329 bits (364), Expect = 6e-88
Identities = 255/297 (86%), Gaps = 6/297 (2%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||||||| | ||||| || | | | |||| |||||||||||||||||||||||||
Sbjct 124426 TACTAAGCAGGATTACTATCGCAACAATTAGTCAACAGTAGGGTAAAACTAACCTGTCTC 124485
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAA-CAATCCAACGCTTACC 118
| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |
Sbjct 124486 ACGACGGTCTAAACCCAGCTCACCTTCCCTATTAGTGGGTGAAACAATCCAACGCTTGGC 124545
Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 124546 GAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 124605
Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238
||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||| |
Sbjct 124606 ATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAGCTTTTCTGACACCTCTTAC 124665
Query 239 CTCAAA-TTTCGAGGGACT-AAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| || ||| | |||||||||||| ||| ||||| ||| |||| ||
Sbjct 124666 CAGAAACCATC--TGGATTAAAAGGATCGATAATCCATGCTTTCGCGGTCTGTACTC 124720
>seq1777
Length=122891
Score = 325 bits (360), Expect = 7e-87
Identities = 234/266 (88%), Gaps = 4/266 (2%)
Strand=Plus/Plus
Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
|||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 98429 GTCAACAGTAGGGTAAAACTAACCTATCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 98488
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
||||||||||||||||||||| |||| |||||||||||||| ||||| ||||||| |
Sbjct 98489 ATTAGTGGGTGAACAATCCAATGCTTGGCGAATTCTGCTTCGCAATGATGGGAAGAGAAG 98548
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 98549 ACACCGAAGGATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATC 98608
Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA-TTTCGAGGGACT-AAAGGATCGAT 267
|||||||||||||||| | ||||||| || ||| || ||| | |||||||||||
Sbjct 98609 CCTGTGGTAACTTTTCCGACACCTCTTACCAGAAACCATC--TGGATTAAAAGGATCGAT 98666
Query 268 AGGCCACACTTTCATGGTTTGTATTC 293
||||||| ||||| ||| |||| ||
Sbjct 98667 AGGCCACGCTTTCGCGGTCTGTACTC 98692
>seq206
Length=388919
Score = 313 bits (346), Expect = 4e-83
Identities = 255/298 (86%), Gaps = 10/298 (3%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGT-CTC 59
|||||||| | ||||| || | | |||| |||||||||||||||||||||| |||
Sbjct 148271 TACTAAGCAGGATTACTATCGCAACATTAGTCAACAGTAGGGTAAAACTAACCTGTTCTC 148212
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 148211 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGCG 148152
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGA-TCAAAAAGCAACGTCGCT 178
||| ||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct 148151 -ATTTTGCTTCGCAATGATAGGAAG-GCCGACATCGAAGGATTCAAAAAGCAACGTCGCT 148094
Query 179 AT-GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237
|| |||||||||||||||||||||||| ||| |||||||||||||||||| |||||||
Sbjct 148093 ATGGAACGCTTGGCTGCCACAAGCCAG-TATTCCTGTGGTAACTTTTCTGACACCTCTTA 148035
Query 238 CCTCAAA-TTTCGAGGGACT-AAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|| ||| || ||| | |||||||||||||||||| ||||| ||| |||| ||
Sbjct 148034 CCAGAAACCATC--TGGATTAAAAGGATCGATAGGCCACGCTTTCGCGGTCTGTACTC 147979
>seq982
Length=194932
Score = 291 bits (322), Expect = 1e-76
Identities = 223/264 (84%), Gaps = 9/264 (3%)
Strand=Plus/Plus
Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
|||| ||||||| |||||||||||||||||| |||||| ||||||| |||||||||||||
Sbjct 154654 GTCAACAGTAGG-TAAAACTAACCTGTCTCACGACGGTTTAAACCCGGCTCACGTTCCCT 154712
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
|| ||||||| ||||||||||||||| |||||||||||||| | ||||||||||||||
Sbjct 154713 ATCAGTGGGTAAACAATCCAACGCTTTTCGAATTCTGCTTCGCAACGATAGGAAGAGCCG 154772
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
|||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 154773 ACATCGAAGGATCAAAAAGCAACGTCGCTA--------TGGCTGCCACAAGCAAGTTATC 154824
Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269
|||||||||||||||||| ||||||| || ||| | || |||||||||||||
Sbjct 154825 CCTGTGGTAACTTTTCTGACACCTCTTACCAGAAACCACCTGGATTAAAAGGATCGATAG 154884
Query 270 GCCACACTTTCATGGTTTGTATTC 293
|| || ||||| ||| |||| ||
Sbjct 154885 GCTACGCTTTCGCGGTCTGTACTC 154908
>seq3177
Length=62491
Score = 262 bits (290), Expect = 7e-68
Identities = 209/248 (84%), Gaps = 4/248 (2%)
Strand=Plus/Plus
Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94
||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||| ||
Sbjct 60727 CAGTAGGGTGAAACTAACCTGTCTCACGACTGTCTAAACCCAGCTCACGTTCCCTACCAG 60786
Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154
||||||||||||| | | || |||||||||||||| ||||| | |||||||||||||
Sbjct 60787 TGGGTGAACAATCTCAAGTTTGGCGAATTCTGCTTCGCAATGATGGAAAGAGCCGACATC 60846
Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214
|||||||||||| ||| ||||||||| ||| | | || |||||||||||||||||||||
Sbjct 60847 GAAGGATCAAAATTCAATGTCGCTATGGACGTTGGACTACCACAAGCCAGTTATCCCTGT 60906
Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAA-TTTCGAGGGACT-AAAGGATCGATAGGCC 272
|||||||||| || |||||| || ||| || ||||| ||||||||||||||||
Sbjct 60907 GGTAACTTTTTTGATACCTCTTACCAGAAACCATC--TGGACTAAAAGGATCGATAGGCC 60964
Query 273 ACACTTTC 280
|| ||||
Sbjct 60965 ACGATTTC 60972
>seq4139
Length=37874
Score = 255 bits (282), Expect = 1e-65
Identities = 188/213 (88%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 85 TCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAG 144
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 9272 TCCCTATTAGTGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAG 9331
Query 145 AGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC-TTGGCTGCCAC-AAGCC 202
||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||
Sbjct 9332 AGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGGACGCTTTGGCTGCCACAAAGCC 9391
Query 203 AGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA-TTTCGAGGGACT-AAAG 260
||||||||||||||||||||||||| ||||||| || ||| || ||| | ||||
Sbjct 9392 AGTTATCCCTGTGGTAACTTTTCTGACACCTCTTACCAGAAACCATC--TGGATTAAAAG 9449
Query 261 GATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||||||||||| ||||| ||| |||| ||
Sbjct 9450 GATCGATAGGCCACGCTTTCGCGGTCTGTACTC 9482
Score = 214 bits (236), Expect = 3e-53
Identities = 179/213 (84%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 83 GTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGA 142
|||||||||||||||||||||| | ||||||| |||||||||||||| |||||||||
Sbjct 4988 GTTCCCTATTAGTGGGTGAACATCCAAACGCTTGGCGAATTCTGCTTCGCAATGATAGGA 4929
Query 143 AGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCC 202
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct 4928 AGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGGACGC-TGGCTGCCACAAGCC 4870
Query 203 AGTTATCCCTG-TGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACT-AAAG 260
||||||||||| |||| | ||||| | |||||| | || || ||| | ||||
Sbjct 4869 AGTTATCCCTGTTGGTTAGCTTTCT-GAACCTCTTACAGAAACCATC--TGGATTAAAAG 4813
Query 261 GATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||||||||| | ||||| ||| |||| ||
Sbjct 4812 GATCGATAGGCCCCGCTTTCGCGGTCTGTACTC 4780
>seq5586
Length=17126
Score = 248 bits (274), Expect = 1e-63
Identities = 237/297 (80%), Gaps = 6/297 (2%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||||||| | ||||| || | | | |||| ||| |||||||||| ||| ||||||
Sbjct 14010 TACTAAGCAGGATTACTATCGCAACAATTAGTCAACAGAAGGGTAAAACCAACTTGTCTC 13951
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
|||| ||||| |||||||||| | |||| ||||||||||||||| ||||||||| ||
Sbjct 13950 ATGAGGGTCTGAACCCAGCTCGCTTTCCAGGTTAGTGGGTGAACAACCCAACGCTTGGCG 13891
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||| |||||| ||| ||| |||||| |||||| ||||||||||||||||||||||||
Sbjct 13890 AATTCGGCTTCGCAATGGTAG-AAGAGCTGACATCAAAGGATCAAAAAGCAACGTCGCTA 13832
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
| |||||| |||||||| ||||| |||||||| |||||| |||||| ||||||| ||
Sbjct 13831 TAGACGCTTAGCTGCCACGAGCCACTTATCCCTCTGGTAATATTTCTGTCACCTCTTACC 13772
Query 240 TCAAA-TTTCGAGGGACT-AAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294
||| || | || | ||||||| ||||||||| ||||| ||| |||| |||
Sbjct 13771 AGAAACCATCTA--GATTAAAAGGATGCATAGGCCACGCTTTCGCGGTCTGTACTCA 13717
>seq2984
Length=69014
Score = 246 bits (272), Expect = 5e-63
Identities = 232/278 (83%), Gaps = 17/278 (6%)
Strand=Plus/Minus
Query 30 GTCATCAG-TAGGGTAAAA--CTAACCTGTCTCATGACGG-TCTA-AACCCAGCTCACGT 84
|||| ||| |||||||||| ||||||||||||| ||||| |||| ||||||||||||||
Sbjct 41903 GTCAACAGCTAGGGTAAAAAACTAACCTGTCTCACGACGGGTCTATAACCCAGCTCACGT 41844
Query 85 TCCCTATTAGTGGGTGAACAATCCAACG-CTTACCGAATT-CTGCTTCGGTA-TGATAGG 141
||||||||||||||||| ||||||| ||| |||||| |||||||| | |||||||
Sbjct 41843 TCCCTATTAGTGGGTGAT---TCCAACGTCTTGGCGAATTTCTGCTTCGCCAATGATAGG 41787
Query 142 AAGAGCCGAC-ATCGAAGGATCAAAAA-GCAACGTCGCTATGAACGCTTGGCTGCCAC-A 198
|||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||| |
Sbjct 41786 AAGAGCCGACCATCGAAGGATCAAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAA 41727
Query 199 AGCCAGTTATCCCTGTGGTAACTTTT-CTGGCACCTCTAGCCTCAAATTTCGAGGGACT- 256
|||||||||||| ||||||||||| ||| ||||||| || ||| ||| |
Sbjct 41726 AGCCAGTTATCCTGTTGGTAACTTTTGCTGACACCTCTTACCAGAAAACCATCTGGATTA 41667
Query 257 AAAGGATCGA-TAGGCCACACTTTCATGGTTTGTATTC 293
|||||||||| |||||||| ||||| ||| |||| ||
Sbjct 41666 AAAGGATCGACTAGGCCACGCTTTCGCGGTCTGTACTC 41629
>seq627
Length=254991
Score = 192 bits (212), Expect = 1e-46
Identities = 159/193 (82%), Gaps = 1/193 (1%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||| |||||||| |||||| |||||| |||||||||| |||||||| |||| ||||||||
Sbjct 153804 TCAACAGTAGGGCAAAACTGACCTGTGTCATGACGGTATAAACCCAACTCAAGTTCCCTA 153863
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
|| || || |||| | ||| || | ||||||| ||||| || |||||||| |||
Sbjct 153864 TTGGTAAGT-AACAGTGCAAGGCCTGGTGAATTCTACTTCGCAATAATAGGAAGGACCGG 153922
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
|||||||||||| ||| |||| | |||||| |||||| |||| |||||||||||||| |
Sbjct 153923 AATCGAAGGATCAGAAACCAACCTTGCTATGGACGCTTAGCTGTCACAAGCCAGTTATTC 153982
Query 211 CTGTGGTAACTTT 223
|||||||||||||
Sbjct 153983 CTGTGGTAACTTT 153995
>seq169
Length=411674
Score = 143 bits (158), Expect = 5e-32
Identities = 141/184 (77%), Gaps = 15/184 (8%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||||||| | ||||| || | | | |||| |||||||||| || || ||||||||
Sbjct 180395 TACTAAGCAGGATTACTATCGCAACAGCTAGTCAACAGTAGGGTATAATTACCCTGTCTC 180336
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||| ||| ||| |||||||| ||||||||||| ||||
Sbjct 180335 ACGACGGTCTAAACCCAGATCATGTTGCCTATTAGAGGGTGAACAATTCAAC-------- 180284
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
| || | ||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 180283 ------GTTTGGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAGGCAACGTGCTTA 180230
Query 180 TGAA 183
||||
Sbjct 180229 TGAA 180226
Score = 136 bits (150), Expect = 7e-30
Identities = 124/155 (80%), Gaps = 1/155 (1%)
Strand=Plus/Plus
Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
|||| |||||||| |||| |||||||||||| | |||||| ||| |||| || || |||
Sbjct 153759 GTCAGCAGTAGGGCAAAATTAACCTGTCTCACAAGGGTCTAGACCTAGCTGACATTGCCT 153818
Query 90 ATTAGTGGG-TGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148
||||||||| |||||| |||||||| ||| ||||| | |||||||||||||||
Sbjct 153819 ATTAGTGGGCCAAACAATTCAACGCTTGGAACATTTTGCTTGGCAATGATAGGAAGAGCC 153878
Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAA 183
||||||||||||| ||| ||||| | ||||||
Sbjct 153879 GACATCGAAGGATTGAAAGGCAACATGCTTATGAA 153913
>seq1020
Length=190053
Score = 138 bits (152), Expect = 2e-30
Identities = 81/84 (96%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
|||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct 26368 GTCAACAGTAGGGTAAAACTAACCTGTCTCACGACGGTCAAAACCCAGCTCACGTTCCCT 26309
Query 90 ATTAGTGGGTGAACAATCCAACGC 113
||||||||||||||||||||||||
Sbjct 26308 ATTAGTGGGTGAACAATCCAACGC 26285
>seq6996
Length=8302
Score = 118 bits (130), Expect = 2e-24
Identities = 174/226 (77%), Gaps = 29/226 (13%)
Strand=Plus/Minus
Query 38 TAGGGTAAAA--CTAA-CCTGTCTCAT-GACGGTCTAAA----CCCAGCTCACGTTCCCT 89
||||||| || |||| ||||||||| ||||||||| | | ||||||| |||||||
Sbjct 376 TAGGGTAGAAACCTAAACCTGTCTCAACGACGGTCTAGAAATCCTCAGCTCAAGTTCCCT 317
Query 90 AT-TAGTGGGTGAACAATCCA----ACGCTTACCGAATTCTGCTTCGGT----ATGATAG 140
| ||||| ||||||| || | |||| |||||||||||| | |||||||
Sbjct 316 ACATAGTGCGTGAACACATCACGAGAGGCTTGGCGAATTCTGCTTACGACAACATGATAG 257
Query 141 GAAGAGCCGA-CATCGAAGGATCAAAA-AGCAA-CGTCGCTAT--GAACG-CTTGGCTGC 194
||||||| | | |||||||||||||| ||||| ||||||||| || || |||||||||
Sbjct 256 -AAGAGCCCAGCTTCGAAGGATCAAAACAGCAAGCGTCGCTATGGGAGCGCCTTGGCTGC 198
Query 195 -CACAAGCCAGTTA-TCCCTGT-GGTAACTT-TTCTG-GCACCTCT 235
|| | |||||||| ||||||| |||||||| | ||| |||||||
Sbjct 197 ACAGACGCCAGTTACTCCCTGTCGGTAACTTGTGCTGAACACCTCT 152
>seq2577
Length=83215
Score = 109 bits (120), Expect = 9e-22
Identities = 66/70 (94%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 75 CAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 134
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 560 CAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAA 501
Query 135 TGATAGGAAG 144
||||||||||
Sbjct 500 TGATAGGAAG 491
>seq550
Length=270600
Score = 95.1 bits (104), Expect = 2e-17
Identities = 72/85 (85%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 69 TAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCT 128
|||| |||||||||||||||||||| || |||||||| |||||||| ||| ||||||
Sbjct 196861 TAAATGCAGCTCACGTTCCCTATTAGGGGCTGAACAATGCAACGCTTGATGAACTCTGCT 196920
Query 129 TCGGTATGATAGGAAGAGCCGACAT 153
||| |||||| |||||||||| ||
Sbjct 196921 TCGCAATGATAAGAAGAGCCGATAT 196945
>seq265
Length=362209
Score = 86.0 bits (94), Expect = 1e-14
Identities = 106/137 (77%), Gaps = 25/137 (18%)
Strand=Plus/Minus
Query 56 TCTCATGACGG--TCTAAACCCAGCTCACGTTC-CCT---------ATTAGTG-----GG 98
||||| ||| | |||||||||||||||||||| ||| ||||||| ||
Sbjct 358064 TCTCACGACTGGTTCTAAACCCAGCTCACGTTCTCCTTATTACCTAATTAGTGGCTACGG 358005
Query 99 TGAA--CAA--TCCAACGCTTACCGAATT-CTGCTTCGGTATGATAG-GAAGAGCCGACA 152
|||| ||| |||||||||| |||||| |||||||| ||||||| ||||||||||||
Sbjct 358004 TGAAACCAAATTCCAACGCTTGGCGAATTCCTGCTTCGCAATGATAGCGAAGAGCCGACA 357945
Query 153 T-CGAA-GGATCAAAAA 167
| |||| ||||||||||
Sbjct 357944 TCCGAAGGGATCAAAAA 357928
>seq1691
Length=128987
Score = 78.8 bits (86), Expect = 2e-12
Identities = 46/48 (96%), Gaps = 0/48 (0%)
Strand=Plus/Plus
Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAG 77
|||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 17697 GTCAACAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAG 17744
>seq389
Length=312070
Score = 75.2 bits (82), Expect = 2e-11
Identities = 44/46 (96%), Gaps = 0/46 (0%)
Strand=Plus/Minus
Query 29 GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACC 74
||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 219769 GGTCAACAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACC 219724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854197960032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |