Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01]
34,708 sequences; 81,908,042 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq34518 86.0 1e-14
seq30933 86.0 1e-14
seq30376 86.0 1e-14
seq29332 86.0 1e-14
seq24900 86.0 1e-14
seq23256 86.0 1e-14
seq22950 86.0 1e-14
seq22668 86.0 1e-14
seq18501 86.0 1e-14
seq16199 86.0 1e-14
seq16135 86.0 1e-14
seq15148 86.0 1e-14
seq13834 86.0 1e-14
seq12316 86.0 1e-14
seq8321 86.0 1e-14
seq7992 86.0 1e-14
seq6545 86.0 1e-14
seq6225 86.0 1e-14
seq6139 86.0 1e-14
seq4466 86.0 1e-14
seq4111 86.0 1e-14
seq2795 86.0 1e-14
seq2518 86.0 1e-14
seq14567 82.4 1e-13
seq20025 78.8 2e-12
>seq34518
Length=19132
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 18537 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 18480
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 18479 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 18426
>seq30933
Length=2182
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 533 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 590
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 591 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 644
>seq30376
Length=2285
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 407 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 464
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 465 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 518
>seq29332
Length=2300
Score = 86.0 bits (94), Expect = 1e-14
Identities = 88/114 (77%), Gaps = 1/114 (1%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | | |||| | |||||| || | || || || |
Sbjct 22 GTACGAGAGGAACCGCAGGTTCCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 80
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 81 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 134
>seq24900
Length=2433
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 2300 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 2357
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 2358 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 2411
>seq23256
Length=2163
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 1728 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 1671
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1670 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 1617
>seq22950
Length=2141
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 715 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 658
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 657 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 604
>seq22668
Length=2568
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 2306 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 2249
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 2248 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 2195
>seq18501
Length=994
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 631 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 688
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 689 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 742
>seq16199
Length=1644
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 360 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 303
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 302 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 249
>seq16135
Length=1088
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 440 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 497
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 498 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 551
>seq15148
Length=964
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 261 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 318
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 319 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 372
>seq13834
Length=984
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 567 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 510
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 509 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 456
>seq12316
Length=1756
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 749 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 692
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 691 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 638
>seq8321
Length=1368
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 234 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 177
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 176 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 123
>seq7992
Length=1380
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 1122 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 1065
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1064 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 1011
>seq6545
Length=1348
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 90 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 147
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 148 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 201
>seq6225
Length=1048
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 337 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 394
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 395 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 448
>seq6139
Length=1529
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 241 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 298
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 299 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 352
>seq4466
Length=1222
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 883 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 940
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 941 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 994
>seq4111
Length=1402
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 768 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 825
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 826 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 879
>seq2795
Length=1230
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 380 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 323
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 322 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 269
>seq2518
Length=906
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | |||||| || | || || || |
Sbjct 314 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTCGATAGACCAAT 257
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 256 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 203
>seq14567
Length=1446
Score = 82.4 bits (90), Expect = 1e-13
Identities = 88/114 (77%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| || | || || || |
Sbjct 77 GTACGAGAGGAACCGCAGG-TTCAGAC-ATNTGGTTCATGTGCTTGGTCGATAGACCAAT 134
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 135 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 188
>seq20025
Length=1712
Score = 78.8 bits (86), Expect = 2e-12
Identities = 48/51 (94%), Gaps = 0/51 (0%)
Strand=Plus/Minus
Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1642 GCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 1592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 818924557312
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