Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterodera_20glycines_20[genbank_20GCA_5F000150805.1_202008-04-01] 34,708 sequences; 81,908,042 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq30328 82.4 6e-11 >seq30328 Length=6095 Score = 82.4 bits (90), Expect = 6e-11 Identities = 128/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 61434 GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATT 61493 ||| || || |||||| | ||||||| | ||| | ||| | |||| || || | Sbjct 2284 GAAGGCCGACTGGGCCCTTCGTTGGATCGCAAGTTCCGACGCTTCTTTTGCGGAGAGACT 2225 Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553 | |||||||| | ||| ||||| | || ||| || ||||| ||||| ||||| Sbjct 2224 CGTTGCATTTGCTGCGGTTGAGGGGATTTTCTTCTCGGGGAGTTTTGCTGCAATTTTTTG 2165 Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613 | | || ||||| || ||| ||||||||||||| |||||| || || || || || || Sbjct 2164 GCTTAAAAAACGAGGCCTTTTGCCCGGTCTGACGCACAGCAACGAATTAATTTCGCGTGA 2105 Query 61614 CGA 61616 ||| Sbjct 2104 CGA 2102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397399827245120