Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq915 158 5e-36 seq36 111 7e-22 seq27 84.2 9e-14 >seq915 Length=7811 Score = 158 bits (174), Expect = 5e-36 Identities = 113/130 (87%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || || ||||||||||||||||||||||||| ||||| ||| |||||||||| Sbjct 3365 AGAGCGTATATGCTGGGACCCGAAAGATGGTGAACTATACCTGAGCAGGATGAAGCCAGA 3306 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||||| || |||| ||||| ||||||||||||||||| | || ||| Sbjct 3305 GGAAACTCTGGTGGAGGTCCGAAGCGATTCTGACGTGCAAATCGATCGTCTGACTTTGGT 3246 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 3245 ATAGGGGCGA 3236 Score = 116 bits (128), Expect = 2e-23 Identities = 124/161 (77%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||| || |||||| | || ||| |||||| || ||||| ||||||| Sbjct 4185 GAGTCGGGTTGTTTGAGATTGCAGCCCAAAGAGGGTGGTAAACCTCATCTAAGGCTAAAT 4126 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| |||||||||||| ||||||| |||| ||||| || |||| |||||| | Sbjct 4125 AC-GACCACGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGTTGCAAAGAACTTTGAA 4067 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| | ||| | |||| || Sbjct 4066 GAGAGAGTTCAAGAGGGCGTGAAACCGCTGAGATGGAAACG 4026 >seq36 Length=391837 Score = 111 bits (122), Expect = 7e-22 Identities = 88/106 (83%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 576 AAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGC 635 |||||||||||||||| ||||| |||| |||||||||| || |||| |||||||| | Sbjct 235837 AAAGATGGTGAACTATACCTGAGTAGGATGAAGCCAGAAGAGACTCCGGTGGAGGTCCAA 235896 Query 636 AGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 |||| ||||| ||||||||| ||||||| | || |||||| |||| Sbjct 235897 AGCGATTCTGACGTGCAAATTGATCGTCTGACTTCGGTATAAGGGC 235942 >seq27 Length=450140 Score = 84.2 bits (92), Expect = 9e-14 Identities = 100/136 (74%), Gaps = 6/136 (4%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||| |||| || | | ||||| | | ||||||||| | |||||| ||| | |||| | | Sbjct 255316 AGAACATATATGCTAGAACCCGTATGGTGGTGAACTGTACCTGAAGAGGATAAAGCTAAA 255257 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG------GCGTGCAAATCGATCGTCAAAT 667 ||||||||||||||||| || | || ||||| | |||| ||| ||||||| | Sbjct 255256 GGAAACTCTGGTGGAGGTCCGAAACGATTCTGAGGTGCGAGTGCGAATTGATCGTCTGAC 255197 Query 668 TTGGGTATAGGGGCGA 683 || ||||||| | ||| Sbjct 255196 TTTGGTATAGCGACGA 255181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079876362200