Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq915 356 4e-96 seq46 78.8 2e-12 >seq915 Length=7811 Score = 356 bits (394), Expect = 4e-96 Identities = 238/263 (90%), Gaps = 4/263 (2%) Strand=Plus/Minus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct 401 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGG 342 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 341 TGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATC 282 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 281 GAAGGATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 222 Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAA-TTTCGAGGGA---CTAAAGGATCGATAGG 270 ||||||||||||| ||||||| || ||| ||| | | | | |||||||||||||| Sbjct 221 GGTAACTTTTCTGACACCTCTTGCTAGAAACCTTCTAAGAAATTCAAAAGGATCGATAGG 162 Query 271 CCACACTTTCATGGTTTGTATTC 293 |||| ||||| ||| ||||||| Sbjct 161 CCACGCTTTCGCGGTCTGTATTC 139 Score = 154 bits (170), Expect = 3e-35 Identities = 117/136 (86%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1124 CAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 1183 Query 222 TTTCTGGCACCTCTAGCCTCAAA-TTTCGAGGGA---CTAAAGGATCGATAGGCCACACT 277 |||||| ||||||| || ||| ||| | | | | |||||||||||||||||| || Sbjct 1184 TTTCTGACACCTCTTGCTAGAAACCTTCTAAGAAATTCAAAAGGATCGATAGGCCACGCT 1243 Query 278 TTCATGGTTTGTATTC 293 ||| ||| ||||||| Sbjct 1244 TTCGCGGTCTGTATTC 1259 >seq46 Length=345232 Score = 78.8 bits (86), Expect = 2e-12 Identities = 78/103 (76%), Gaps = 10/103 (10%) Strand=Plus/Minus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||| ||||||||| |||| ||||| |||| | |||||||| ||||||| ||||||| | Sbjct 259417 CAGTTAGGTAAAACTGACCTATCTCACGACGTTTTAAACCCAACTCACGTCCCCTATTGG 259358 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA 137 || |||||| || |||||||||||||| |||| Sbjct 259357 TGTGTGAAC----------TTGGCGAATTCTGCTTCGCAATGA 259325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854350752384