Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29] 26,196 sequences; 258,067,405 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq22566 84.2 1e-14 seq19228 84.2 1e-14 seq9356 84.2 1e-14 seq24084 78.8 5e-13 seq22757 78.8 5e-13 seq22513 78.8 5e-13 seq22170 78.8 5e-13 seq19591 78.8 5e-13 seq17084 78.8 5e-13 seq16544 78.8 5e-13 seq16276 78.8 5e-13 seq15604 78.8 5e-13 seq14997 78.8 5e-13 seq14928 78.8 5e-13 seq13473 78.8 5e-13 seq10719 78.8 5e-13 seq6126 78.8 5e-13 seq1826 78.8 5e-13 seq694 78.8 5e-13 seq258 78.8 5e-13 seq16199 77.0 2e-12 seq20631 75.2 6e-12 seq20146 75.2 6e-12 seq17872 75.2 6e-12 >seq22566 Length=2610 Score = 84.2 bits (92), Expect = 1e-14 Identities = 90/118 (76%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| ||||| | ||| | || | | || ||| || || | |||| | Sbjct 366 GAACCGGAAGACTTTCGTTTCTGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 307 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 306 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 249 >seq19228 Length=3399 Score = 84.2 bits (92), Expect = 1e-14 Identities = 90/118 (76%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| ||||| | ||| | || | | || ||| || || | |||| | Sbjct 2873 GAACCGGAAGACTTTCGTTTCTGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 2932 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 2933 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 2990 >seq9356 Length=8468 Score = 84.2 bits (92), Expect = 1e-14 Identities = 90/118 (76%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| ||||| | ||| | || | | || ||| || || | |||| | Sbjct 3772 GAACCGGAAGACTTTCGTTTCTGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 3713 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 3712 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 3655 >seq24084 Length=2326 Score = 78.8 bits (86), Expect = 5e-13 Identities = 89/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | | || ||| || || | |||| | Sbjct 713 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 772 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 773 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 830 >seq22757 Length=2571 Score = 78.8 bits (86), Expect = 5e-13 Identities = 89/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | | || ||| || || | |||| | Sbjct 2251 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 2310 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 2311 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 2368 >seq22513 Length=2620 Score = 78.8 bits (86), Expect = 5e-13 Identities = 89/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | | || ||| || || | |||| | Sbjct 1419 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 1360 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 1359 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 1302 >seq22170 Length=2688 Score = 78.8 bits (86), Expect = 5e-13 Identities = 89/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | | || ||| || || | |||| | Sbjct 348 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 289 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 288 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 231 >seq19591 Length=3306 Score = 78.8 bits (86), Expect = 5e-13 Identities = 89/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | | || ||| || || | |||| | Sbjct 3030 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 2971 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 2970 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 2913 >seq17084 Length=4031 Score = 78.8 bits (86), Expect = 5e-13 Identities = 89/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | | || ||| || || | |||| | Sbjct 744 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 803 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 804 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 861 >seq16544 Length=4232 Score = 78.8 bits (86), Expect = 5e-13 Identities = 89/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | | || ||| || || | |||| | Sbjct 1027 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 1086 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 1087 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 1144 >seq16276 Length=4326 Score = 78.8 bits (86), Expect = 5e-13 Identities = 89/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | | || ||| || || | |||| | Sbjct 447 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 506 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 507 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 564 >seq15604 Length=4589 Score = 78.8 bits (86), Expect = 5e-13 Identities = 89/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | | || ||| || || | |||| | Sbjct 1673 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 1614 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 1613 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 1556 >seq14997 Length=4832 Score = 78.8 bits (86), Expect = 5e-13 Identities = 89/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | | || ||| || || | |||| | Sbjct 3612 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 3553 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 3552 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 3495 >seq14928 Length=4856 Score = 78.8 bits (86), Expect = 5e-13 Identities = 89/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | | || ||| || || | |||| | Sbjct 4085 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 4144 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 4145 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 4202 >seq13473 Length=5512 Score = 78.8 bits (86), Expect = 5e-13 Identities = 89/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | | || ||| || || | |||| | Sbjct 2958 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 3017 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 3018 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 3075 >seq10719 Length=7227 Score = 78.8 bits (86), Expect = 5e-13 Identities = 89/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | | || ||| || || | |||| | Sbjct 36 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 95 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 96 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 153 >seq6126 Length=12684 Score = 78.8 bits (86), Expect = 5e-13 Identities = 89/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | | || ||| || || | |||| | Sbjct 9187 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 9128 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 9127 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 9070 >seq1826 Length=27278 Score = 78.8 bits (86), Expect = 5e-13 Identities = 89/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | | || ||| || || | |||| | Sbjct 19796 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 19737 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 19736 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 19679 >seq694 Length=39777 Score = 78.8 bits (86), Expect = 5e-13 Identities = 89/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | | || ||| || || | |||| | Sbjct 24864 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 24923 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 24924 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 24981 >seq258 Length=53973 Score = 78.8 bits (86), Expect = 5e-13 Identities = 89/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | | || ||| || || | |||| | Sbjct 50717 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCGGC 50776 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 50777 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 50834 >seq16199 Length=4357 Score = 77.0 bits (84), Expect = 2e-12 Identities = 90/118 (76%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| || ||| | || | | || ||| || || | |||| | Sbjct 3937 GAACCGGAAGACTTTCGTTTC-CGGAAGCTCCC-ACCAAGGCAATATAATTTCCATCGGC 3994 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 3995 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 4052 >seq20631 Length=3040 Score = 75.2 bits (82), Expect = 6e-12 Identities = 89/117 (76%), Gaps = 3/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| || ||| | || | | || ||| || || | |||| | Sbjct 2926 GAACCGGAAGACTTTCGTTTC-CGGAAGCTCCC-ACCAAGGCAATATAATTTCCATCGGC 2983 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| ||||| Sbjct 2984 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCG 3040 >seq20146 Length=3160 Score = 75.2 bits (82), Expect = 6e-12 Identities = 88/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | | || ||| || || | ||| | Sbjct 2691 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACCAAGGCAATATAATTTCCATCAGC 2750 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 2751 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 2808 >seq17872 Length=3789 Score = 75.2 bits (82), Expect = 6e-12 Identities = 88/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAAC-ATCGCC 59 ||||| |||||||| |||| | ||| | || | || ||| || || | |||| | Sbjct 1009 GAACCGGAAGACTTTCGTTTCCGGGAAGCTCCCCACAAAGGCAATATAATTTCCATCGGC 950 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||||||| | |||| | ||||||||||||| |||||| Sbjct 949 GGATCGCTAGTTGGCATCGTTTACGGTCAGAACTAGGGCGGTATCTGATCGCCTTCGA 892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278331628440