Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29] 26,196 sequences; 258,067,405 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq23024 80.6 7e-13 seq21315 80.6 7e-13 seq17674 80.6 7e-13 seq16954 80.6 7e-13 seq16199 80.6 7e-13 seq16133 80.6 7e-13 seq14928 80.6 7e-13 seq10575 80.6 7e-13 seq9356 80.6 7e-13 seq7176 80.6 7e-13 seq1826 80.6 7e-13 seq694 80.6 7e-13 seq412 80.6 7e-13 seq258 80.6 7e-13 seq17960 75.2 3e-11 >seq23024 Length=2514 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 818 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 877 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 878 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 917 >seq21315 Length=2874 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 1799 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 1858 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 1859 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 1898 >seq17674 Length=3847 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 28 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 87 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 88 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 127 >seq16954 Length=4073 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 995 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 1054 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 1055 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 1094 >seq16199 Length=4357 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 210 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 269 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 270 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 309 >seq16133 Length=4381 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 124 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 183 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 184 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 223 >seq14928 Length=4856 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 365 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 424 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 425 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 464 >seq10575 Length=7350 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 146 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 87 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 86 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 47 >seq9356 Length=8468 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 7498 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 7439 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 7438 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 7399 >seq7176 Length=10958 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 10125 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 10184 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 10185 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 10224 >seq1826 Length=27278 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 23520 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 23461 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 23460 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 23421 >seq694 Length=39777 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 21140 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 21199 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 21200 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 21239 >seq412 Length=47148 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 126 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 185 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 186 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 225 >seq258 Length=53973 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | ||| ||||| ||| |||| ||||||||| || Sbjct 46993 TCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTGGCTACCTTAAGAG 47052 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 47053 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 47092 >seq17960 Length=3763 Score = 75.2 bits (82), Expect = 3e-11 Identities = 78/101 (77%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| ||||| | || ||||| ||| |||| ||||||||| || Sbjct 77 TCGTTGATCCATTCGTGCGCGTCGGTAGTTTGCCGACGAGGCATTTGGCTACCTTAAGAG 136 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG 168 || || ||||| |||||||||||| | |||| |||||| Sbjct 137 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-AATCAAG 176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260469720832