Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20floridensis_20[genbank_20GCA_5F000751915.1_202014-06- 13] 58,696 sequences; 96,673,063 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq34206 104 4e-20 seq23114 87.8 3e-15 >seq34206 Length=561 Score = 104 bits (114), Expect = 4e-20 Identities = 59/60 (98%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 60 GTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 1 >seq23114 Length=1019 Score = 87.8 bits (96), Expect = 3e-15 Identities = 50/51 (98%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTC 86 ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 969 AGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTC 1019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853898501376