Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20floridensis_20[genbank_20GCA_5F000751915.1_202014-06- 13] 58,696 sequences; 96,673,063 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq48618 73.4 4e-11 >seq48618 Length=299 Score = 73.4 bits (80), Expect = 4e-11 Identities = 123/174 (71%), Gaps = 3/174 (2%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTCGAATACATTACCATGG 71 |||||||||| ||||| |||| | |||| ||||| | | ||| |||| | ||||| Sbjct 246 TTTACTTTGAGAAAATCAGAGTGCTCAATACAGGCGTATCGCTTGAATGATTGTGCATGG 187 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||||||| |||| | |||| || |||| | ||||| |||| | ||||| | Sbjct 186 AATAATAGAAAAGGA-TTTCGGTCCTCTTTTATTGGTTTTGTGGACTG-AGATAATGGTT 129 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | |||| || | |||||||||||||||| Sbjct 128 AACAGGGACAAACGGGGGCATTCGTATCTCTGCGTGAGAGGTGAAATTCTTGGA 75 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511708867840