Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20floridensis_20[genbank_20GCA_5F000751915.1_202014-06- 13] 58,696 sequences; 96,673,063 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq8547 111 1e-19 >seq8547 Length=3126 Score = 111 bits (122), Expect = 1e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 61435 AAAGCGGATTGGGC-CTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATT 61493 ||||| |||||||| |||| ||||| | |||| | ||| ||||||||||||| | Sbjct 70 AAAGCTGATTGGGCTCTTCG-TTGGACTGCTAGTAAAGAAGCTTCATTTGGTGAACGTCT 128 Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553 | || ||||| | ||| |||||| |||| ||| |||| ||||| ||||| ||||| Sbjct 129 CATTGCTTTTGCCGCGGTTGAGGGTATATTCTTCTCTGGAAGTTTTGCTGCAATTTTTTG 188 Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613 | | |||||||| || |||||| || ||||| || ||||| || || || || || Sbjct 189 GCTAAAGAAACGCGGTTATATGCCTGGACTGACACAAAGTAATGAATTAATTTCTCGAGA 248 Query 61614 CGAGGGCATGCATTGTGATTTTGCT 61638 || || | ||| | ||||||||| Sbjct 249 TGAAGGACTTCATCGAGATTTTGCT 273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397283596749440