Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= AAMG01000026.1 Length=199 Score E Sequences producing significant alignments: (Bits) Value seq3226 82.4 8e-14 >seq3226 Length=26697 Score = 82.4 bits (90), Expect = 8e-14 Identities = 114/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATC-AATCAGA 59 ||| |||| | ||||||||||||||||| ||||||||||| ||||||| | | | | | Sbjct 19487 GCACTCTTCAAATGAATGGCTGCTTCCAAGCCAACATCCTGACTGTCTAAGCGACTGAAC 19546 Query 60 CTTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTC 119 |||| |||| | ||||| | |||| || | || |||| || || ||||| | Sbjct 19547 CTTC-TTAGTTCAACTTAGAATATATTTGGGGACCTTAGCTGATGATCTGGGTTCTTTCC 19605 Query 120 CTCTCGGGCACGGACCTTACCACCCATGCCCTCACTC 156 |||||||| ||| |||| | ||| ||||||||| Sbjct 19606 CTCTCGGGTTAGGATCTTAACGCCCTAACCCTCACTC 19642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537582032400