Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29]
3,450 sequences; 53,012,960 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq339 237 7e-60
seq3147 158 5e-36
seq2736 158 5e-36
seq803 158 5e-36
seq354 158 5e-36
seq280 158 5e-36
seq260 158 5e-36
seq2319 152 2e-34
seq1045 150 7e-34
seq2737 123 1e-25
seq38 123 1e-25
>seq339
Length=3656
Score = 237 bits (262), Expect = 7e-60
Identities = 223/281 (79%), Gaps = 5/281 (2%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463
|| ||||||||| ||||||||||||||||||| |||| | ||||||| ||||| |
Sbjct 799 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 858
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522
||||||| | || || ||| ||| || || || ||| | ||||||||| ||||
Sbjct 859 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGCGGGTGCACCGCCGAC 915
Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582
||| | |||| | | || || || |||| |||||| |||| |||||||||||||||
Sbjct 916 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATG 975
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |
Sbjct 976 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 1035
Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 1036 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 1076
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 412 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 471
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| |||||||||||||| ||||||| | || |||||||||||| ||||
Sbjct 472 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTT 531
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 532 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 576
>seq3147
Length=42808
Score = 158 bits (174), Expect = 5e-36
Identities = 216/301 (72%), Gaps = 23/301 (8%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464
|| ||||||||| ||||||||||||||||| || | | | || ||| ||||||||| ||
Sbjct 3299 CGACCCGTCTTGAAACACGGACCAAGGAGTTTATCGTGTGCGCAAGTTTTTGGGTGTTAA 3240
Query 465 ACCCGTGC--GCGTAATGAAAGTGAACG--------------GAGGTGGGAACCCGTG-- 506
| | | ||| ||||||||| || | || ||| || | |
Sbjct 3239 AAACCTAAAAGCGAAATGAAAGTAAATGATTCTTTAGAGTCTGATGTGCGATCTTTTTTC 3180
Query 507 ---AGGGTGCACCATCGACCGATCCTGA-TGTCTTCGGATGGATTTGAGTAAGAGCATAG 562
| ||||| ||| | || || || | ||| | | | || | | | |||||| ||
Sbjct 3179 AAAAAAGTGCAGCATGGCCCCATTCTAACTGTTTACAGTAGGGTG-GCGGAAGAGCGTAC 3121
Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622
| || |||||||||||||||||||||| ||||| ||| ||||||||||||||||||
Sbjct 3120 GCGGTGAGACCCGAAAGATGGTGAACTATTCCTGAGCAGGACGAAGCCAGAGGAAACTCT 3061
Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682
|||||| | || |||||||||| ||||||||||||||||| | |||||||||||||||
Sbjct 3060 GGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGGTATAGGGGCG 3001
Query 683 A 683
|
Sbjct 3000 A 3000
Score = 123 bits (136), Expect = 1e-25
Identities = 113/143 (79%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| |||||| ||||| | || | || |||||| ||| ||||| || |||
Sbjct 3806 GAGTCGGGTTGCTTGGGATCGCAGCCCAAAGTCGGTGGTAAACTTCATCTAAGACTTAAT 3747
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|||| | ||| |||||||| ||||||| |||| ||||| || ||||||||||| |
Sbjct 3746 ATTGCCACGAGTCCGATAGCAAACAAGTACTGTGAAGGAAAGTTGCAAAGCACTTTGAAG 3687
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
||||||||||| || ||||||||
Sbjct 3686 AGAGAGTTAAAGAGGACGTGAAA 3664
>seq2736
Length=14981
Score = 158 bits (174), Expect = 5e-36
Identities = 216/301 (72%), Gaps = 23/301 (8%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-- 462
|| ||||||||| ||||||||||||||||| || | | | || ||| |||||||||
Sbjct 14253 CGACCCGTCTTGAAACACGGACCAAGGAGTTTATCGTGTGCGCAAGTTTTTGGGTGTTGA 14194
Query 463 AAACCCGTGCGCGTAATGAAAGTGAACG--------------GAGGTGGGAACCCGTG-- 506
||||| ||| ||||||||| || | || ||| || | |
Sbjct 14193 AAACCTAAAAGCGAAATGAAAGTAAATGACTCTTTAGAGTCTGATGTGCGATCTTTTTTC 14134
Query 507 ---AGGGTGCACCATCGACCGATCCTGA-TGTCTTCGGATGGATTTGAGTAAGAGCATAG 562
| ||||| ||| | || || || | ||| | | | || | | | |||||| ||
Sbjct 14133 AAAAAAGTGCAGCATGGCCCCATTCTAACTGTTTACAGTAGGGTG-GCGGAAGAGCGTAC 14075
Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622
| || |||||||||||||||||||||| ||||| ||| ||||||||||||||||||
Sbjct 14074 GCGGTGAGACCCGAAAGATGGTGAACTATTCCTGAGCAGGACGAAGCCAGAGGAAACTCT 14015
Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682
|||||| | || |||||||||| ||||||||||||||||| | |||||||||||||||
Sbjct 14014 GGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGGTATAGGGGCG 13955
Query 683 A 683
|
Sbjct 13954 A 13954
Score = 123 bits (136), Expect = 1e-25
Identities = 113/143 (79%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| |||||| ||||| | || | || |||||| ||| ||||| || |||
Sbjct 14759 GAGTCGGGTTGCTTGGGATCGCAGCCCAAAGTCGGTGGTAAACTTCATCTAAGACTTAAT 14700
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|||| | ||| |||||||| ||||||| |||| ||||| || ||||||||||| |
Sbjct 14699 ATTGCCACGAGTCCGATAGCAAACAAGTACTGTGAAGGAAAGTTGCAAAGCACTTTGAAG 14640
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
||||||||||| || ||||||||
Sbjct 14639 AGAGAGTTAAAGAGGACGTGAAA 14617
>seq803
Length=9593
Score = 158 bits (174), Expect = 5e-36
Identities = 216/301 (72%), Gaps = 23/301 (8%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464
|| ||||||||| ||||||||||||||||| || | | | || ||| ||||||||| ||
Sbjct 9255 CGACCCGTCTTGAAACACGGACCAAGGAGTTTATCGTGTGCGCAAGTTTTTGGGTGTTAA 9314
Query 465 ACCCGTGC--GCGTAATGAAAGTGAACG--------------GAGGTGGGAACCCGTG-- 506
| | | ||| ||||||||| || | || ||| || | |
Sbjct 9315 AAACCTAAAAGCGAAATGAAAGTAAATGATTCTTTAGAGTCTGATGTGCGATCTTTTTTC 9374
Query 507 ---AGGGTGCACCATCGACCGATCCTGA-TGTCTTCGGATGGATTTGAGTAAGAGCATAG 562
| ||||| ||| | || || || | ||| | | | || | | | |||||| ||
Sbjct 9375 AAAAAAGTGCAGCATGGCCCCATTCTAACTGTTTACAGTAGGGTG-GCGGAAGAGCGTAC 9433
Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622
| || |||||||||||||||||||||| ||||| ||| ||||||||||||||||||
Sbjct 9434 GCGGTGAGACCCGAAAGATGGTGAACTATTCCTGAGCAGGACGAAGCCAGAGGAAACTCT 9493
Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682
|||||| | || |||||||||| ||||||||||||||||| | |||||||||||||||
Sbjct 9494 GGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGGTATAGGGGCG 9553
Query 683 A 683
|
Sbjct 9554 A 9554
Score = 123 bits (136), Expect = 1e-25
Identities = 113/143 (79%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| |||||| ||||| | || | || |||||| ||| ||||| || |||
Sbjct 8749 GAGTCGGGTTGCTTGGGATCGCAGCCCAAAGTCGGTGGTAAACTTCATCTAAGACTTAAT 8808
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|||| | ||| |||||||| ||||||| |||| ||||| || ||||||||||| |
Sbjct 8809 ATTGCCACGAGTCCGATAGCAAACAAGTACTGTGAAGGAAAGTTGCAAAGCACTTTGAAG 8868
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
||||||||||| || ||||||||
Sbjct 8869 AGAGAGTTAAAGAGGACGTGAAA 8891
>seq354
Length=3833
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||||| | || || ||
Sbjct 3609 TCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 3668
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| |||||||||||||| ||||||| | || |||||||||||| ||||
Sbjct 3669 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAAGGACTT 3728
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | ||||||||| | |||||||||
Sbjct 3729 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 3773
>seq280
Length=2846
Score = 158 bits (174), Expect = 5e-36
Identities = 216/301 (72%), Gaps = 23/301 (8%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464
|| ||||||||| ||||||||||||||||| || | | | || ||| ||||||||| ||
Sbjct 1641 CGACCCGTCTTGAAACACGGACCAAGGAGTTTATCGTGTGCGCAAGTTTTTGGGTGTTAA 1700
Query 465 ACCCGTGC--GCGTAATGAAAGTGAACG--------------GAGGTGGGAACCCGTG-- 506
| | | ||| ||||||||| || | || ||| || | |
Sbjct 1701 AAACCTAAAAGCGAAATGAAAGTAAATGATTCTTTAGAGTCTGATGTGCGATCTTTTTTC 1760
Query 507 ---AGGGTGCACCATCGACCGATCCTGA-TGTCTTCGGATGGATTTGAGTAAGAGCATAG 562
| ||||| ||| | || || || | ||| | | | || | | | |||||| ||
Sbjct 1761 AAAAAAGTGCAGCATGGCCCCATTCTAACTGTTTACAGTAGGGTG-GCGGAAGAGCGTAC 1819
Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622
| || |||||||||||||||||||||| ||||| ||| ||||||||||||||||||
Sbjct 1820 GCGGTGAGACCCGAAAGATGGTGAACTATTCCTGAGCAGGACGAAGCCAGAGGAAACTCT 1879
Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682
|||||| | || |||||||||| ||||||||||||||||| | |||||||||||||||
Sbjct 1880 GGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGGTATAGGGGCG 1939
Query 683 A 683
|
Sbjct 1940 A 1940
Score = 123 bits (136), Expect = 1e-25
Identities = 113/143 (79%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| |||||| ||||| | || | || |||||| ||| ||||| || |||
Sbjct 1135 GAGTCGGGTTGCTTGGGATCGCAGCCCAAAGTCGGTGGTAAACTTCATCTAAGACTTAAT 1194
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|||| | ||| |||||||| ||||||| |||| ||||| || ||||||||||| |
Sbjct 1195 ATTGCCACGAGTCCGATAGCAAACAAGTACTGTGAAGGAAAGTTGCAAAGCACTTTGAAG 1254
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
||||||||||| || ||||||||
Sbjct 1255 AGAGAGTTAAAGAGGACGTGAAA 1277
>seq260
Length=2701
Score = 158 bits (174), Expect = 5e-36
Identities = 216/301 (72%), Gaps = 23/301 (8%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464
|| ||||||||| ||||||||||||||||| || | | | || ||| ||||||||| ||
Sbjct 571 CGACCCGTCTTGAAACACGGACCAAGGAGTTTATCGTGTGCGCAAGTTTTTGGGTGTTAA 630
Query 465 ACCCGTGC--GCGTAATGAAAGTGAACG--------------GAGGTGGGAACCCGTG-- 506
| | | ||| ||||||||| || | || ||| || | |
Sbjct 631 AAACCTAAAAGCGAAATGAAAGTAAATGATTCTTTAGAGTCTGATGTGCGATCTTTTTTC 690
Query 507 ---AGGGTGCACCATCGACCGATCCTGA-TGTCTTCGGATGGATTTGAGTAAGAGCATAG 562
| ||||| ||| | || || || | ||| | | | || | | | |||||| ||
Sbjct 691 AAAAAAGTGCAGCATGGCCCCATTCTAACTGTTTACAGTAGGGTG-GCGGAAGAGCGTAC 749
Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622
| || |||||||||||||||||||||| ||||| ||| ||||||||||||||||||
Sbjct 750 GCGGTGAGACCCGAAAGATGGTGAACTATTCCTGAGCAGGACGAAGCCAGAGGAAACTCT 809
Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682
|||||| | || |||||||||| ||||||||||||||||| | |||||||||||||||
Sbjct 810 GGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGGTATAGGGGCG 869
Query 683 A 683
|
Sbjct 870 A 870
Score = 123 bits (136), Expect = 1e-25
Identities = 113/143 (79%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| |||||| ||||| | || | || |||||| ||| ||||| || |||
Sbjct 65 GAGTCGGGTTGCTTGGGATCGCAGCCCAAAGTCGGTGGTAAACTTCATCTAAGACTTAAT 124
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|||| | ||| |||||||| ||||||| |||| ||||| || ||||||||||| |
Sbjct 125 ATTGCCACGAGTCCGATAGCAAACAAGTACTGTGAAGGAAAGTTGCAAAGCACTTTGAAG 184
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
||||||||||| || ||||||||
Sbjct 185 AGAGAGTTAAAGAGGACGTGAAA 207
>seq2319
Length=17570
Score = 152 bits (168), Expect = 2e-34
Identities = 213/298 (71%), Gaps = 23/298 (8%)
Strand=Plus/Minus
Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467
||||||||| ||||||||||||||||| || | | | || ||| ||||||||| |||
Sbjct 819 CCCGTCTTGAAACACGGACCAAGGAGTTTATCGTGTGCGCAAGTTTTTGGGTGTTAAAAA 760
Query 468 CGTGC--GCGTAATGAAAGTGAACG--------------GAGGTGGGAACCCGTG----- 506
| | ||| ||||||||| || | || ||| | | |
Sbjct 759 CCTAGAAGCGAAATGAAAGTAAATGATTCTTTAGAGTCTGATGTGCAATCTTTTTTCAGA 700
Query 507 AGGGTGCACCATCGACCGATCCTGA-TGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565
| ||||| ||| | || || || | ||| | | | |||| | |||||| || |
Sbjct 699 AAAGTGCATCATGGCCCCATTCTAACTGTTTACAGTAGGATGCCGG-AAGAGCGTACGCG 641
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
|| |||||||||||||||||||||| ||||| ||| |||||||||||||||||||||
Sbjct 640 GTGAGACCCGAAAGATGGTGAACTATTCCTGAGCAGGACGAAGCCAGAGGAAACTCTGGT 581
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| | || |||||||||| ||||||||||||||||| | ||||||||||||||||
Sbjct 580 GGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGGTATAGGGGCGA 523
Score = 152 bits (168), Expect = 2e-34
Identities = 213/298 (71%), Gaps = 23/298 (8%)
Strand=Plus/Minus
Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467
||||||||| ||||||||||||||||| || | | | || ||| ||||||||| |||
Sbjct 2891 CCCGTCTTGAAACACGGACCAAGGAGTTTATCGTGTGCGCAAGTTTTTGGGTGTTAAAAA 2832
Query 468 CGTGC--GCGTAATGAAAGTGAACG--------------GAGGTGGGAACCCGTG----- 506
| | ||| ||||||||| || | || ||| | | |
Sbjct 2831 CCTAGAAGCGAAATGAAAGTAAATGATTCTTTAGAGTCTGATGTGCAATCTTTTTTCAGA 2772
Query 507 AGGGTGCACCATCGACCGATCCTGA-TGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565
| ||||| ||| | || || || | ||| | | | || | | | |||||| || |
Sbjct 2771 AAAGTGCATCATGGCCCCATTCTAACTGTTTACAGTAGGGTG-GCGGAAGAGCGTACGCG 2713
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
|| |||||||||||||||||||||| ||||| ||| |||||||||||||||||||||
Sbjct 2712 GTGAGACCCGAAAGATGGTGAACTATTCCTGAGCAGGACGAAGCCAGAGGAAACTCTGGT 2653
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| | || |||||||||| ||||||||||||||||| | ||||||||||||||||
Sbjct 2652 GGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGGTATAGGGGCGA 2595
Score = 116 bits (128), Expect = 2e-23
Identities = 113/144 (78%), Gaps = 1/144 (1%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| |||||| ||||| | || | || |||||| ||| ||||| || |||
Sbjct 1329 GAGTCGGGTTGCTTGGGATCGCAGCCCAAAGTCGGTGGTAAACTTCATCTAAGACTTAAT 1270
Query 100 ATTGGCCAGAGACCGATAGCGCA-CAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158
|||| | ||| |||||||| | |||||| |||| ||||| || ||||||||||| |
Sbjct 1269 ATTGCCACGAGTCCGATAGCAAATCAAGTACTGTGAAGGAAAGTTGCAAAGCACTTTGAA 1210
Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182
||||||||||| || ||||||||
Sbjct 1209 GAGAGAGTTAAAGAGGACGTGAAA 1186
Score = 116 bits (128), Expect = 2e-23
Identities = 113/144 (78%), Gaps = 1/144 (1%)
Strand=Plus/Minus
Query 40 GAGTCGA-GTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAA 98
|||||| |||| |||||| ||||| | || | || |||||| ||| ||||| || ||
Sbjct 3401 GAGTCGGTGTTGCTTGGGATCGCAGCCCAAAGTCGGTGGTAAACTTCATCTAAGACTTAA 3342
Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158
||||| | ||| |||||||| ||||||| |||| ||||| || ||||||||||| |
Sbjct 3341 TATTGCCACGAGTCCGATAGCAAACAAGTACTGTGAAGGAAAGTTGCAAAGCACTTTGAA 3282
Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182
||||||||||| || ||||||||
Sbjct 3281 GAGAGAGTTAAAGAGGACGTGAAA 3258
Score = 107 bits (118), Expect = 8e-21
Identities = 71/79 (90%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 605 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664
|||||||||||||||||||||||| | || |||||||||| |||||||||||||||||
Sbjct 4745 GAAGCCAGAGGAAACTCTGGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCT 4686
Query 665 AATTTGGGTATAGGGGCGA 683
| ||||||||||||||||
Sbjct 4685 GACTTGGGTATAGGGGCGA 4667
>seq1045
Length=14645
Score = 150 bits (166), Expect = 7e-34
Identities = 112/131 (85%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612
|||||| || | || |||||||||||||||||||||| ||||| ||| ||||||||
Sbjct 14607 AAGAGCGTACGCGGTGAGACCCGAAAGATGGTGAACTATTCCTGAGCAGGACGAAGCCAG 14548
Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672
|||||||||||||||| | || |||||||||| ||||||||||||||||| | |||||
Sbjct 14547 AGGAAACTCTGGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGG 14488
Query 673 TATAGGGGCGA 683
|||||||||||
Sbjct 14487 TATAGGGGCGA 14477
>seq2737
Length=44827
Score = 123 bits (136), Expect = 1e-25
Identities = 113/143 (79%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| |||||| ||||| | || | || |||||| ||| ||||| || |||
Sbjct 28161 GAGTCGGGTTGCTTGGGATCGCAGCCCAAAGTCGGTGGTAAACTTCATCTAAGACTTAAT 28220
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|||| | ||| |||||||| ||||||| |||| ||||| || ||||||||||| |
Sbjct 28221 ATTGCCACGAGTCCGATAGCAAACAAGTACTGTGAAGGAAAGTTGCAAAGCACTTTGAAG 28280
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
||||||||||| || ||||||||
Sbjct 28281 AGAGAGTTAAAGAGGACGTGAAA 28303
>seq38
Length=2052
Score = 123 bits (136), Expect = 1e-25
Identities = 113/143 (79%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| |||||| ||||| | || | || |||||| ||| ||||| || |||
Sbjct 502 GAGTCGGGTTGCTTGGGATCGCAGCCCAAAGTCGGTGGTAAACTTCATCTAAGACTTAAT 561
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|||| | ||| |||||||| ||||||| |||| ||||| || ||||||||||| |
Sbjct 562 ATTGCCACGAGTCCGATAGCAAACAAGTACTGTGAAGGAAAGTTGCAAAGCACTTTGAAG 621
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
||||||||||| || ||||||||
Sbjct 622 AGAGAGTTAAAGAGGACGTGAAA 644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079925997500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |