Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq339 89.7 2e-16 seq3147 86.0 3e-15 seq2737 86.0 3e-15 seq2736 86.0 3e-15 seq803 86.0 3e-15 seq280 86.0 3e-15 seq354 82.4 4e-14 seq2319 80.6 1e-13 seq38 80.6 1e-13 >seq339 Length=3656 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| |||||||||| |||||||||||| |||| |||||||||||||| Sbjct 209 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 267 >seq3147 Length=42808 Score = 86.0 bits (94), Expect = 3e-15 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||| ||||||||||||||||||||||||||||| ||||| | ||| || Sbjct 4014 GGAAAAGAAACTAAACAGGATTCCCTCAGTAACGGCGAGTGAACTGGGAAATGTCCATCG 3955 Query 61 CCGAATC 67 | |||| Sbjct 3954 CTTAATC 3948 >seq2737 Length=44827 Score = 86.0 bits (94), Expect = 3e-15 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||| ||||||||||||||||||||||||||||| ||||| | ||| || Sbjct 27953 GGAAAAGAAACTAAACAGGATTCCCTCAGTAACGGCGAGTGAACTGGGAAATGTCCATCG 28012 Query 61 CCGAATC 67 | |||| Sbjct 28013 CTTAATC 28019 >seq2736 Length=14981 Score = 86.0 bits (94), Expect = 3e-15 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||| ||||||||||||||||||||||||||||| ||||| | ||| || Sbjct 14967 GGAAAAGAAACTAAACAGGATTCCCTCAGTAACGGCGAGTGAACTGGGAAATGTCCATCG 14908 Query 61 CCGAATC 67 | |||| Sbjct 14907 CTAAATC 14901 >seq803 Length=9593 Score = 86.0 bits (94), Expect = 3e-15 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||| ||||||||||||||||||||||||||||| ||||| | ||| || Sbjct 8541 GGAAAAGAAACTAAACAGGATTCCCTCAGTAACGGCGAGTGAACTGGGAAATGTCCATCG 8600 Query 61 CCGAATC 67 | |||| Sbjct 8601 CTTAATC 8607 >seq280 Length=2846 Score = 86.0 bits (94), Expect = 3e-15 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||| ||||||||||||||||||||||||||||| ||||| | ||| || Sbjct 927 GGAAAAGAAACTAAACAGGATTCCCTCAGTAACGGCGAGTGAACTGGGAAATGTCCATCG 986 Query 61 CCGAATC 67 | |||| Sbjct 987 CTTAATC 993 >seq354 Length=3833 Score = 82.4 bits (90), Expect = 4e-14 Identities = 55/60 (92%), Gaps = 1/60 (2%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCA-GGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| | ||||||||| |||||||||||| |||| |||||||||||||| Sbjct 3405 GGAAAAGAAACTAACAATGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 3464 >seq2319 Length=17570 Score = 80.6 bits (88), Expect = 1e-13 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||| |||||||||||||||||||||||||||| ||||| | ||| || Sbjct 1537 GGAAAAGAAACTAAATAGGATTCCCTCAGTAACGGCGAGTGAACTGGGAAATGTCCATCG 1478 Query 61 CCGAATC 67 | |||| Sbjct 1477 CTAAATC 1471 Score = 80.6 bits (88), Expect = 1e-13 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||| |||||||||||||||||||||||||||| ||||| | ||| || Sbjct 3608 GGAAAAGAAACTAAATAGGATTCCCTCAGTAACGGCGAGTGAACTGGGAAATGTCCATCG 3549 Query 61 CCGAATC 67 | |||| Sbjct 3548 CTAAATC 3542 >seq38 Length=2052 Score = 80.6 bits (88), Expect = 1e-13 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||| |||||||||||||||||||||||||||| ||||| | ||| || Sbjct 294 GGAAAAGAAACTAAATAGGATTCCCTCAGTAACGGCGAGTGAACTGGGAAATGTCCATCG 353 Query 61 CCGAATC 67 | |||| Sbjct 354 CTAAATC 360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230392548000