Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29]
3,450 sequences; 53,012,960 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq354 75.2 7e-12
seq2737 71.6 8e-11
seq2319 71.6 8e-11
seq803 71.6 8e-11
seq280 71.6 8e-11
seq166 71.6 8e-11
seq38 71.6 8e-11
>seq354
Length=3833
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Minus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 2588 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 2531
Query 122 GCT 124
|||
Sbjct 2530 GCT 2528
>seq2737
Length=44827
Score = 71.6 bits (78), Expect = 8e-11
Identities = 46/49 (94%), Gaps = 1/49 (2%)
Strand=Plus/Minus
Query 76 AGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||| |||||||||||||||||||||||| |||||| ||||
Sbjct 27256 AGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 27209
>seq2319
Length=17570
Score = 71.6 bits (78), Expect = 8e-11
Identities = 46/49 (94%), Gaps = 1/49 (2%)
Strand=Plus/Plus
Query 76 AGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||| |||||||||||||||||||||||| |||||| ||||
Sbjct 1634 AGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 1681
Score = 71.6 bits (78), Expect = 8e-11
Identities = 46/49 (94%), Gaps = 1/49 (2%)
Strand=Plus/Plus
Query 76 AGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||| |||||||||||||||||||||||| |||||| ||||
Sbjct 3704 AGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 3751
>seq803
Length=9593
Score = 71.6 bits (78), Expect = 8e-11
Identities = 46/49 (94%), Gaps = 1/49 (2%)
Strand=Plus/Minus
Query 76 AGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||| |||||||||||||||||||||||| |||||| ||||
Sbjct 7846 AGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 7799
>seq280
Length=2846
Score = 71.6 bits (78), Expect = 8e-11
Identities = 46/49 (94%), Gaps = 1/49 (2%)
Strand=Plus/Minus
Query 76 AGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||| |||||||||||||||||||||||| |||||| ||||
Sbjct 233 AGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 186
>seq166
Length=2306
Score = 71.6 bits (78), Expect = 8e-11
Identities = 46/49 (94%), Gaps = 1/49 (2%)
Strand=Plus/Minus
Query 76 AGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||| |||||||||||||||||||||||| |||||| ||||
Sbjct 1649 AGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 1602
>seq38
Length=2052
Score = 71.6 bits (78), Expect = 8e-11
Identities = 46/49 (94%), Gaps = 1/49 (2%)
Strand=Plus/Plus
Query 76 AGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||| |||||||||||||||||||||||| |||||| ||||
Sbjct 1341 AGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 1388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300790271000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |