Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq354 75.2 7e-12 seq2737 71.6 8e-11 seq2319 71.6 8e-11 seq803 71.6 8e-11 seq280 71.6 8e-11 seq166 71.6 8e-11 seq38 71.6 8e-11 >seq354 Length=3833 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 2588 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 2531 Query 122 GCT 124 ||| Sbjct 2530 GCT 2528 >seq2737 Length=44827 Score = 71.6 bits (78), Expect = 8e-11 Identities = 46/49 (94%), Gaps = 1/49 (2%) Strand=Plus/Minus Query 76 AGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 27256 AGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 27209 >seq2319 Length=17570 Score = 71.6 bits (78), Expect = 8e-11 Identities = 46/49 (94%), Gaps = 1/49 (2%) Strand=Plus/Plus Query 76 AGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 1634 AGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 1681 Score = 71.6 bits (78), Expect = 8e-11 Identities = 46/49 (94%), Gaps = 1/49 (2%) Strand=Plus/Plus Query 76 AGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 3704 AGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 3751 >seq803 Length=9593 Score = 71.6 bits (78), Expect = 8e-11 Identities = 46/49 (94%), Gaps = 1/49 (2%) Strand=Plus/Minus Query 76 AGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 7846 AGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 7799 >seq280 Length=2846 Score = 71.6 bits (78), Expect = 8e-11 Identities = 46/49 (94%), Gaps = 1/49 (2%) Strand=Plus/Minus Query 76 AGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 233 AGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 186 >seq166 Length=2306 Score = 71.6 bits (78), Expect = 8e-11 Identities = 46/49 (94%), Gaps = 1/49 (2%) Strand=Plus/Minus Query 76 AGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 1649 AGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 1602 >seq38 Length=2052 Score = 71.6 bits (78), Expect = 8e-11 Identities = 46/49 (94%), Gaps = 1/49 (2%) Strand=Plus/Plus Query 76 AGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 1341 AGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 1388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300790271000