Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq3226 100 7e-19 >seq3226 Length=26697 Score = 100 bits (110), Expect = 7e-19 Identities = 101/129 (78%), Gaps = 3/129 (2%) Strand=Plus/Plus Query 275 TTACGCACTCTTTCAAGGA-TGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACT 333 |||||||||||| || || ||||||||||||||||||| ||||| |||||| || ||| Sbjct 19483 TTACGCACTCTTCAAATGAATGGCTGCTTCCAAGCCAACATCCTGACTGTCTAAGCGACT 19542 Query 334 CCACATCCTT--TCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTT 391 || | ||| | | ||| || | || ||| ||||||||||||||||||| | || Sbjct 19543 GAACCTTCTTAGTTCAACTTAGAATATATTTGGGGACCTTAGCTGATGATCTGGGTTCTT 19602 Query 392 TCCCTCTCG 400 ||||||||| Sbjct 19603 TCCCTCTCG 19611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177559372800