Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29]
3,450 sequences; 53,012,960 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq3226 138 4e-30
>seq3226
Length=26697
Score = 138 bits (152), Expect = 4e-30
Identities = 149/192 (78%), Gaps = 4/192 (2%)
Strand=Plus/Minus
Query 274 AAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTG 333
|| |||||||| | |||| |||| | || |||||||| ||| | |||| |||
Sbjct 19671 AACCTCCGAATACT-ATCAATTTTGCTTAGG-AGTGAGGGTTAGGGCGTTAAGATCCTAA 19614
Query 334 CCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAAC 393
||||||||| ||||| || || ||||||||||| ||| |||| ||||||| |||
Sbjct 19613 CCCGAGAGGGAAAGAACCCAGATCATCAGCTAAGGTCCCCAAATATATTCTAAGTTGAAC 19554
Query 394 TAACGAAGTCTGATT-GCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTA 452
||| |||| | | | ||| |||||| |||||||||||||||||||||||||||||||
Sbjct 19553 TAA-GAAGGTTCAGTCGCTTAGACAGTCAGGATGTTGGCTTGGAAGCAGCCATTCATTTG 19495
Query 453 AAGAGTGCGTAA 464
||||||||||||
Sbjct 19494 AAGAGTGCGTAA 19483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1689541708800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |