Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20hapla_20[genbank_20GCA_5F000172435.1_202008-09-29] 3,450 sequences; 53,012,960 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq3226 138 4e-30 >seq3226 Length=26697 Score = 138 bits (152), Expect = 4e-30 Identities = 149/192 (78%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 274 AAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTG 333 || |||||||| | |||| |||| | || |||||||| ||| | |||| ||| Sbjct 19671 AACCTCCGAATACT-ATCAATTTTGCTTAGG-AGTGAGGGTTAGGGCGTTAAGATCCTAA 19614 Query 334 CCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAAC 393 ||||||||| ||||| || || ||||||||||| ||| |||| ||||||| ||| Sbjct 19613 CCCGAGAGGGAAAGAACCCAGATCATCAGCTAAGGTCCCCAAATATATTCTAAGTTGAAC 19554 Query 394 TAACGAAGTCTGATT-GCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTA 452 ||| |||| | | | ||| |||||| ||||||||||||||||||||||||||||||| Sbjct 19553 TAA-GAAGGTTCAGTCGCTTAGACAGTCAGGATGTTGGCTTGGAAGCAGCCATTCATTTG 19495 Query 453 AAGAGTGCGTAA 464 |||||||||||| Sbjct 19494 AAGAGTGCGTAA 19483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689541708800